Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto6g3216 | TTGCAATGGAAATGCAGCTTTCTCAACTTTCTGAATTATGATGATCATCGTCCAATGGGAACCTGTCATGCCGAGTTAGATGTCGTACACGAGGAAAGGAAGGTTAGTTCCCAGTTCCCAGCTCCCAGGTCTCTTATAATTTATCTATCTAGGTCTCCTTCACCCCGTGACACCAAATCTCCTGTGAGAGGCCATCGATCAAGGTCAAGATCATTATCCAGGTCTAGGAGGAGTCGCTCCAGGAGTCGGGATTCAATAGATGTTTCGAATCCTGGAAATAATTTGTATGTAACAGGTTTGTCCACCAGGATCACTAACAGTGATCTTGAGAATTATTTCGGCAAAGAAGGAAAGGTTGTTGATTGCCACCTGGTTACAGATCCTCGCTCCAAAGAGTCTCGTGGATTTGGTTTTGTCACTATGGAAACTAATGAAGATGCTGAACGCTGTATCAAGTACCTGAATCGCTCTGTTTTTGAAGGTCGATTAATAACTGTTGAAAAGGCAAAGAGAAAACGTGGCAGGACACCTACTCCAGGCAAATACCATGGTTTGAGAGATAAGCGAGGACGTGATTGGAGAAGGTCCCGTAGTCAGTCACCTAGGCATTGGCCGGAGAGAGATAATTATTCGAAGGACCGACGAGGAAGATCTCGTTCTCCTTACAGTAGGAGGACAGATGATTACTCTACCTCATATAGGAGGCGAAGGGAACGCTCATTGTCAGCTGGTGATAGTCGCTATCCAAGATGA | 753 | 0.4515 | LQWKCSFLNFLNYDDHRPMGTCHAELDVVHEERKVSSQFPAPRSLIIYLSRSPSPRDTKSPVRGHRSRSRSLSRSRRSRSRSRDSIDVSNPGNNLYVTGLSTRITNSDLENYFGKEGKVVDCHLVTDPRSKESRGFGFVTMETNEDAERCIKYLNRSVFEGRLITVEKAKRKRGRTPTPGKYHGLRDKRGRDWRRSRSQSPRHWPERDNYSKDRRGRSRSPYSRRTDDYSTSYRRRRERSLSAGDSRYPR | 250 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto6g3216 | 250 | Gene3D | - | 50 | 177 | IPR012677 | - | |
Sto6g3216 | 250 | MobiDBLite | consensus disorder prediction | 50 | 92 | - | - | |
Sto6g3216 | 250 | MobiDBLite | consensus disorder prediction | 170 | 250 | - | - | |
Sto6g3216 | 250 | SUPERFAMILY | RNA-binding domain, RBD | 90 | 198 | IPR035979 | GO:0003676 | |
Sto6g3216 | 250 | SMART | rrm2_1 | 94 | 167 | IPR003954 | GO:0003676 | |
Sto6g3216 | 250 | PANTHER | OS08G0385900 PROTEIN | 50 | 238 | - | - | |
Sto6g3216 | 250 | MobiDBLite | consensus disorder prediction | 180 | 244 | - | - | |
Sto6g3216 | 250 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 95 | 164 | IPR000504 | GO:0003723 | |
Sto6g3216 | 250 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 93 | 171 | IPR000504 | GO:0003723 | |
Sto6g3216 | 250 | PANTHER | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED | 50 | 238 | - | - | |
Sto6g3216 | 250 | CDD | RRM_RBMX_like | 92 | 171 | - | - | |
Sto6g3216 | 250 | SMART | rrm1_1 | 94 | 167 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto6g3216 | Sto-Chr6 | 38719093 | 38722559 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto6g3216 | 94 | 181 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 28.409 | 4.36e-06 | 45.4 |