Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3214 ATGCTCATCTCTGATCATGGACTCGTCGGAGACCTCTTCTTTTCCAATTCCGACCCTTTTCCTTTCACCCCCAACGACGTCGTTCAACCACCACCAAACACCCTCCACGAaatccctcctcctcctcttgaCCCCTTTTCGCCTCCTCTGTTTTCCTTCGATTCCAATCCCCCGAGTTTAGAATCGGAGATTGGGGATTTGAATTTCTGTGGGTTGGATGGGTTCAAAGCGGTGAAGAGTGAGGATTCCCAAATGGGGGTGGTTGATTATAACAATGGTGCTACTGCTATGCAATTGCAGAGGAGCTATAGCAGCAGGTCTTTCGAGGCAAAGCCTGCTTCTTTCTTCCAACCTCACTATGACTCTCTCATGGATCCCTCCCATTTTCAAACCCACCCCTTGGCTTCTCCCGAAAACAGATTTCTCGCTACAGGACAAATCAGAAGAGTGTGCAGTACTGGAGATTTGCAGAAAGAGGGCTTGTTGTTAGAGGAAGCAAACTTCAAAGTAGGGCGATACAGTgcagaagagagaagagagaaaatctCAAAATACAGAGCCAAGCGAAGTCAGAGAAACTTCAACAAGACTATTAagTATGCATGCCGAAAGACACTAGCCGACAATCGACCACGAATACGTGGCAGGTTCGCACGCAACGATGAGAGCTGCGACAATCCGAAGGCTTCCTCTTCATGTTCAGCCAGAGATGAAGACGAAGAAGACTTCTGGTTTGAAGGATTGCATGAAGAGCAAGAGGATATAACAATGAGGGCATCAGCATATGGAGGAGGAGCTCAGTTTCAGTGCTATGGCTTTGGAGTGTGA 828 0.4505 MLISDHGLVGDLFFSNSDPFPFTPNDVVQPPPNTLHEIPPPPLDPFSPPLFSFDSNPPSLESEIGDLNFCGLDGFKAVKSEDSQMGVVDYNNGATAMQLQRSYSSRSFEAKPASFFQPHYDSLMDPSHFQTHPLASPENRFLATGQIRRVCSTGDLQKEGLLLEEANFKVGRYSAEERREKISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDESCDNPKASSSCSARDEDEEDFWFEGLHEEQEDITMRASAYGGGAQFQCYGFGV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3214 275 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 76 269 IPR045281 GO:0009909
Sto6g3214 275 PANTHER CCT MOTIF FAMILY PROTEIN 76 269 - -
Sto6g3214 275 Pfam CCT motif 178 220 IPR010402 GO:0005515
Sto6g3214 275 ProSiteProfiles CCT domain profile. 178 220 IPR010402 GO:0005515
Sto6g3214 275 MobiDBLite consensus disorder prediction 218 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3214 Sto-Chr6 38692874 38693971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3214 174 223 C2C2-CO-like Transcription Factor Family AT5G57660 50.000 3.29e-10 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto6g3214 CCT 7.1e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3214 - - hbr:110656051 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3214 6 38692874 38693971 Sto6g3214 6 38692874 38693971 ECH