Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3206 ATGGCTACCAAAGAGTCCAGTTCTGCTGCTTCAACCGATGGTAAAATCAAAAGGGTTCTCACTCATGGTGGTCGATACGTACAGTACAATGTATACGGAAACTTGTTCGAGGTCTCCTCCAAGTACGTTCCTCCTATTCGCCCAATCGGAAGGGGTGCTTATGGTATCGTTTGttcaaattttGATGGAAGCAGAAGCAAGTTTCGGCATTGGGTTTTGCCATATGGTTTTATCAGACGTAGTGCTATTTCGAGTCCGGATAATCTGCTATCTGGTGCTGCTGTGAATTCAGATACACATGAGGAAGTTGCCATCAAGAAGATTGGTAACGCATTTGACAACATAATTGATGCTAAAAGGACATTGAGGGAAATTAAGCTCCTACGCTACATGGACCATGAAAATATAATTGCTATCAAGGATATCATAAGACCACCGAAAAAGGAGACCTTTAATGATGTATACATAGTTTATGAATTGATGGACACTGATCTTCATCAGATAATTCGTTCTGATCAATCTCTTACTGATGACCATTGTCAGTACTTTCTATACCAGCTGTTACGGGGGCTAAAATATGTCCATTCAGCTAATGTCTTGCACCGCGATCTTAAACCTAGCAATTTACTTCTGAATTCAAATTGTGACCTTAAAATCGGGGACTTTGGTCTGGCAAGGACCACATCTGAAACTGATTTCATGACAGAATATGTTGTCACTCGATGGTACCGAGCCCCAGAACTGCTACTTAATTGTTCAGAGTACACCTCAGCAATTGATGTTTGGTCTGTTGGTTGCATCTTTGGCGAAATTATGACCAGAGAGCCCTTGTTTCCTGGAAAAGATTATGTACATCAACTAAGGCTTATAACAGAGTTAATAGGTTCACCTGACGATGCCAGCCTGGGATTCCTCCGAAGTGAAAATGCCAGAAGATATCTTAGACAGCTTCCACAATGCCGGAAGCAAAAGTTCTCGGCTAGATTCCCTAATATGTCTCCTGGGGCATTGGATCTGCTAGAAAAGATGCTTATCTTCGATCCCAGCAAACGCATTACAGTTGATGAAGCACTATGTCACTCGTATCTGTCATCACTGCATGACATGAATGATGAACCAGTCTGTCCCAGGCCATTCAGTTTTGACTTTGAGCAGCCATCATGCACTGAAGAGCACATCAAGGAGCTCATATGGAGGGAATCAGTGAAGTTCAATCCAGATCCAGCCCATCAAATTTTTACCACAGTATTACCAATCATATTACACCCTGTTCCCAGGGAACTGAATCCTTACTGCAATGGGTCTTCTGGGAAGTTACATACCCCATTGTTCTCTGGTCCCTGGTCTGGTAACAGATCACATGGTACAGGAGTCACACCACTTGAAATGCCAGCAACATCTGTACAAGTCCATGGAACTTTCTTAGCCTTCTTTGCTAGTCCAATTGTTGCATTGGATATGCAGATTCCAGTAAAAGGGTCACCAGAAATACCCTCCAACCTTGCTGCCATAGTTACATTCTCTGCAATTATATCTCGATAG 1542 0.4248 MATKESSSAASTDGKIKRVLTHGGRYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCSNFDGSRSKFRHWVLPYGFIRRSAISSPDNLLSGAAVNSDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRYMDHENIIAIKDIIRPPKKETFNDVYIVYELMDTDLHQIIRSDQSLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNSNCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENARRYLRQLPQCRKQKFSARFPNMSPGALDLLEKMLIFDPSKRITVDEALCHSYLSSLHDMNDEPVCPRPFSFDFEQPSCTEEHIKELIWRESVKFNPDPAHQIFTTVLPIILHPVPRELNPYCNGSSGKLHTPLFSGPWSGNRSHGTGVTPLEMPATSVQVHGTFLAFFASPIVALDMQIPVKGSPEIPSNLAAIVTFSAIISR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3206 513 SMART serkin_6 43 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3206 513 Gene3D Transferase(Phosphotransferase) domain 1 161 390 - -
Sto6g3206 513 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 62 - -
Sto6g3206 513 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 90 410 - -
Sto6g3206 513 CDD STKc_TEY_MAPK 36 406 - -
Sto6g3206 513 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 90 410 - -
Sto6g3206 513 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 62 - -
Sto6g3206 513 Pfam Protein kinase domain 94 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3206 513 ProSiteProfiles Protein kinase domain profile. 43 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3206 513 Gene3D Phosphorylase Kinase; domain 1 92 400 - -
Sto6g3206 513 Gene3D Phosphorylase Kinase; domain 1 19 68 - -
Sto6g3206 513 ProSitePatterns MAP kinase signature. 112 215 IPR003527 GO:0004707|GO:0005524|GO:0006468
Sto6g3206 513 SUPERFAMILY Protein kinase-like (PK-like) 94 372 IPR011009 -
Sto6g3206 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3206 Sto-Chr6 38622596 38629992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3206 1 406 MAP Kinase Gene Family AT4G01370 75.369 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sto6g3206 Pkinase 1.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3206 - - jre:109004185 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3206 6 38622596 38629992 Sto6g3206 6 38622596 38629992 ECH