Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3192 ATGGATGAAGTTGCATACTTGATGGACTGGGATTTGCAGGCTATTGTGAAAGGGTGCAGCAGTAGTGAAGCCCTCATAGACCACCCATATCCTAATCATGATGATCTTCTCTTCACCACAACTTTTCCAGAATTCTCAGAAACCACATCTGTCCTTGACGAATTAGCAGAGCTTTACAAGCCTTTCTACCCTCTTTCGCCACCACAAAAAACCATCATCCCTGAACAAGTCATCAAAGCTTCATCCTCGGAGGAATTAGAAGTAGTCGTCCAAGCAGATTTGCAGAATCCCGCCATATCTAAATCTAAAAgaagCAAGAAGAATCAGAACAAGAGGGTGGTGAAGCAGGTGACAGCAGAGGGTCTATGCGACACATGGGCATGGCGTAAATACGGGCAGAAGCCTATAAAGGGATCGCCATATCCCAGAAGCTACTATAGGTGTAGTAGCTCAAAAGGGTGCTTGGCGAGGAAGCAAGTGGAACGAAGCCATTTGGATCCTGCGGTTTTCATCGTTACCTATACTGCAGAACACAGTCACCTTCATCCACCTCGTACCCGCAGAAACAAATACTCGCTTTCATCTGAAACTACTACTGCTCAACAACCTGCAGATCAATCCTCGAATTCTTCACCAACGTCCACGACTTTCGAAGACCAGCTTGTGTCGAAGGAGAAGGAGGAACATGTGGTTGAGCCTGTGACGGCTGATCATAGTACAGGACTGGCGAGTTATGATGATTGGATTCCATGCATTGAGGAGCTTAATGGACTGGGCCAAGAATTTGCATTAGATGCTTACTTCATGGATTTTGATCACACTTGA 825 0.4558 MDEVAYLMDWDLQAIVKGCSSSEALIDHPYPNHDDLLFTTTFPEFSETTSVLDELAELYKPFYPLSPPQKTIIPEQVIKASSSEELEVVVQADLQNPAISKSKRSKKNQNKRVVKQVTAEGLCDTWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFIVTYTAEHSHLHPPRTRRNKYSLSSETTTAQQPADQSSNSSPTSTTFEDQLVSKEKEEHVVEPVTADHSTGLASYDDWIPCIEELNGLGQEFALDAYFMDFDHT 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3192 274 MobiDBLite consensus disorder prediction 180 235 - -
Sto6g3192 274 Pfam WRKY DNA -binding domain 124 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g3192 274 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 228 IPR044810 GO:0003700
Sto6g3192 274 MobiDBLite consensus disorder prediction 220 234 - -
Sto6g3192 274 Gene3D WRKY domain 106 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g3192 274 MobiDBLite consensus disorder prediction 188 219 - -
Sto6g3192 274 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 228 - -
Sto6g3192 274 SMART WRKY_cls 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g3192 274 ProSiteProfiles WRKY domain profile. 117 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g3192 274 SUPERFAMILY WRKY DNA-binding domain 117 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3192 Sto-Chr6 38540671 38541599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3192 1 215 WRKY Transcription Factor Family AT4G23550 45.417 1.10e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto6g3192 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3192 K13426 - gmx:102663255 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3192 6 38540671 38541599 Sto6g3192 6 38540671 38541599 ECH
Sto6g3192 6 38540671 38541599 Sto6g1071 6 10460415 10461595 ECH