Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3189 ATGGCGAGCGATCTTGACAAGAAAGCCAAAGAAGCTTTCGTTGACGACGACTTTTCTCTGGCTCTTCTCTTATACTCCCAAGCCATCGATTTAGATCCTACCAACGCCGATCTTTTTGCCGATAGAGCGCAGGCCCACATTAAACTCAACAACTTCACTGAAGCAATTTCTGATGCAAACAAAGCAATCCAGTTGAACCCATCATTGGCCAAGGCGTACCTTCGTAAAGGGACTGCTTGTGTTAAGCTTGAGGAGTATCATACTGCCAAGACAGCACTTGAAATTGGTGCCTCTTTCGCTCAAAATGATTCAAGATTCAGCAAGTTGATCAAGGAATGTGAGCGTCATATTGCAGAGGAATCAAGTGGCAGCACTGGCGCTTCATCAGAAAATGGGTCAGCAGTGACTTCATCGCCCAGTACAACTGAAGAAGCTGAAAGAGTTAGTCGTGTGTGTCAAACGAATACAGATGCCTCTATGAGAACAAAATACAGGCATGAATACTACCAGAAACCAGAGGAAGTCGTTCTGACAATATTTGCGAAAGGAATACCAGCCAAAAATGTGGTTGTTGACTTTGGTGAACAGATTCTGAGTGTTACTATTGATGTTCCTGGCCAAGATGCTTATCACTATCAACCTCGATTATTTGGGAAGATATTACCTAATAAGTGCAGATTTGAGGTGTTGTCAACCAAAGTTGAAATCCGTCTAGCAAAAGCTGAGTCTATTAATTGGACATCTTTCGAATATAGCAAGGATGTGCTTCCCCAGAAAATTAACAAGCCATCAAATGGATCTCAAAGGCCTGCATATCCATCATCAAAGCTAACGAGAGATTGGGATAAGCTGGAAGCTCAAGTGAAAAACGAGGAGAAGGAAGAAAAGCTAGATGGTGATGCTGGATTGAACAAACTGTTCCGGGATATATTCCAGAATGCAGATGAGGACATGAGGAGAGCGATGACCAAGTCTTTTGTGGAGTCAAATGGAACAGTGCTGTCAACAGATTGGAAAGAAGTGGGATCAAAGAAGGTGGAAGGCAGTCCTCCAGAAGGTTTGGAGTTGAAGAAATGGGAATACTGA 1086 0.4309 MASDLDKKAKEAFVDDDFSLALLLYSQAIDLDPTNADLFADRAQAHIKLNNFTEAISDANKAIQLNPSLAKAYLRKGTACVKLEEYHTAKTALEIGASFAQNDSRFSKLIKECERHIAEESSGSTGASSENGSAVTSSPSTTEEAERVSRVCQTNTDASMRTKYRHEYYQKPEEVVLTIFAKGIPAKNVVVDFGEQILSVTIDVPGQDAYHYQPRLFGKILPNKCRFEVLSTKVEIRLAKAESINWTSFEYSKDVLPQKINKPSNGSQRPAYPSSKLTRDWDKLEAQVKNEEKEEKLDGDAGLNKLFRDIFQNADEDMRRAMTKSFVESNGTVLSTDWKEVGSKKVEGSPPEGLELKKWEY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3189 361 Coils Coil 274 294 - -
Sto6g3189 361 CDD p23_CS_SGT1_like 167 250 - -
Sto6g3189 361 Gene3D Tetratricopeptide repeat domain 1 145 IPR011990 GO:0005515
Sto6g3189 361 Pfam Tetratricopeptide repeat 17 56 - -
Sto6g3189 361 ProSiteProfiles SGS domain profile. 271 361 IPR007699 -
Sto6g3189 361 SUPERFAMILY HSP20-like chaperones 151 258 IPR008978 -
Sto6g3189 361 MobiDBLite consensus disorder prediction 341 361 - -
Sto6g3189 361 MobiDBLite consensus disorder prediction 119 152 - -
Sto6g3189 361 PANTHER PROTEIN SGT1 HOMOLOG A 1 361 - -
Sto6g3189 361 Pfam CS domain 165 240 IPR007052 -
Sto6g3189 361 SMART tpr_5 2 35 IPR019734 GO:0005515
Sto6g3189 361 SMART tpr_5 36 69 IPR019734 GO:0005515
Sto6g3189 361 SMART tpr_5 70 103 IPR019734 GO:0005515
Sto6g3189 361 Pfam SGS domain 279 359 IPR007699 -
Sto6g3189 361 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
Sto6g3189 361 Gene3D - 162 253 IPR008978 -
Sto6g3189 361 MobiDBLite consensus disorder prediction 121 152 - -
Sto6g3189 361 PANTHER PROTEIN SGT1 HOMOLOG 1 361 IPR044563 GO:0051087
Sto6g3189 361 SUPERFAMILY TPR-like 4 114 IPR011990 GO:0005515
Sto6g3189 361 ProSiteProfiles CS domain profile. 161 250 IPR007052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3189 Sto-Chr6 38520070 38523999 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3189 1 96 U-box Gene Family AT3G07370 30.000 2.37e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3189 K12795 - gmx:100784022 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3189 6 38520070 38523999 Sto6g3189 6 38520070 38523999 ECH