Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3175 ATGCCCTCCGCCAGAACCCAACTCAACTCCGATGCTCCACCTCCCAATGGCCTCTCCGTCTTTCCTCCCAATTCCAAGCCTCCACCGCCGCAACATCCTCTCTCCTCCGTCCTCGGCCGCGTCCTCCGCCGTCCCATGGAGGACGTCCGTTCCACCTACATCTTCGGCCGTGAACTCGGTCGCGGTCAGTTTGGTGTGACCTACTTGGTCACACACAAAGTCACTAAGCAACAATTCGCCTGCAAATCCATCGCCACTCGCAAACTCGTGAACGGCGACGATGTCGATGATATTCGGCGCGAGGTTCAGATCATGCACCATCTCACTGGTCATCGCAATATTGTGGAGCTCAAAGGAGCTTACGAGGACCGCCACTCCGTCAATTTAGTCATGGAGCTCTGCGCTGGAGGCGAGCTCTTCGATAGGATCATAACCAAGGGGCATTACTCGGAGCGAGCCGCCGCTATCTTGTGTCGCCAGATCGTGACGGTGGTGCATAATTGTCACTCCATGGGTGTGATGCATAGGGATTTGAAGCCCGAGAACTTCTTGTTCCTCGGTAAAGACGAAAATTCGCCACTTAAGGCCACTGATTTTGGTCTCTCCGTGTTTCTCAAGACAGGGGATGTATTTAAAGATCTTGTTGGGAGTGCATATTATGTTGCTCCTGAGGTGCTCCGTAGAAGTTATGGACCTGAAGCTGATATATGGAGTGCCGGGGTTATATTATACATTCTTCTCTGTGGTGTCCCTCCCTTCTGGGCTGAAAATGAACAGGGTATCTTCGATGCTATTCTTCGTGGACATATTGATTTTGCGTCAAAACCTTGGCCTTCCATATCTAGTAGCGCAAAAGATTTGGTCAAAAAGATGCTACGGGATGATCCTAAAGAGCGGCTTTCAGCAGTTGATGTCCTGAATCATCCTTGGATGAGAGAAGATGGCGATGCATCTGATAAGCCTCTTGATATTGCTGTTTTGACTAGAATGAAACAATTCCGGGCAATGAACAAACTAAAGAAAGTAGCTCTAAAGgTAATTGCAGAAAATCTTTCTGAAGAAGAAATCATTGGCTTAAAAGAAATGTTCAAATCCATGGACACAGATAATAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTCCCCAAACTGGGTAGTAAGCTTTCTGAGTCTGAAGTGAGGCAGTTGATGGAAGCTGCAGATGTGGATGGAAATGGAACCATTGATTATATTGAATTTATAACAGCTACCATGCACATGAATAGAGTGGAAAGAGAGGACCACATATACAAAGCATTTGAATACTTTGATAAGGATAAGAGCGGGTATATCACAAAGGAAGAGTTGGAATGTGCGCTTAAGAAGTATAACATGGGTGATGAGAAAACAATAAAGGAGATCATTGCTGAAGTTGACGCAGACAATGATGGAAAAATTAACTATGAAGAGTTTGTAGCGATGATGAGAAAAGGCAACCCAGAATTAGTTAACAACAGACGTCGCAAGTAA 1515 0.4594 MPSARTQLNSDAPPPNGLSVFPPNSKPPPPQHPLSSVLGRVLRRPMEDVRSTYIFGRELGRGQFGVTYLVTHKVTKQQFACKSIATRKLVNGDDVDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIITKGHYSERAAAILCRQIVTVVHNCHSMGVMHRDLKPENFLFLGKDENSPLKATDFGLSVFLKTGDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLCGVPPFWAENEQGIFDAILRGHIDFASKPWPSISSSAKDLVKKMLRDDPKERLSAVDVLNHPWMREDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGSKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREDHIYKAFEYFDKDKSGYITKEELECALKKYNMGDEKTIKEIIAEVDADNDGKINYEEFVAMMRKGNPELVNNRRRK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3175 504 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 1 12 496 - -
Sto6g3175 504 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Sto6g3175 504 ProSiteProfiles EF-hand calcium-binding domain profile. 390 425 IPR002048 GO:0005509
Sto6g3175 504 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Sto6g3175 504 SMART serkin_6 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3175 504 MobiDBLite consensus disorder prediction 16 33 - -
Sto6g3175 504 SUPERFAMILY Protein kinase-like (PK-like) 25 333 IPR011009 -
Sto6g3175 504 ProSiteProfiles Protein kinase domain profile. 53 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3175 504 SMART efh_1 394 422 IPR002048 GO:0005509
Sto6g3175 504 SMART efh_1 465 493 IPR002048 GO:0005509
Sto6g3175 504 SMART efh_1 430 458 IPR002048 GO:0005509
Sto6g3175 504 SMART efh_1 358 386 IPR002048 GO:0005509
Sto6g3175 504 CDD STKc_CAMK 53 310 - -
Sto6g3175 504 SUPERFAMILY EF-hand 350 491 IPR011992 -
Sto6g3175 504 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Sto6g3175 504 Gene3D Transferase(Phosphotransferase) domain 1 139 322 - -
Sto6g3175 504 MobiDBLite consensus disorder prediction 1 33 - -
Sto6g3175 504 Gene3D Phosphorylase Kinase; domain 1 55 138 - -
Sto6g3175 504 Gene3D - 323 494 - -
Sto6g3175 504 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Sto6g3175 504 ProSitePatterns EF-hand calcium-binding domain. 367 379 IPR018247 -
Sto6g3175 504 Pfam Protein kinase domain 55 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3175 504 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 496 - -
Sto6g3175 504 Pfam EF-hand domain pair 359 419 IPR002048 GO:0005509
Sto6g3175 504 Pfam EF-hand domain pair 429 491 IPR002048 GO:0005509
Sto6g3175 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Sto6g3175 504 ProSitePatterns EF-hand calcium-binding domain. 403 415 IPR018247 -
Sto6g3175 504 ProSiteProfiles EF-hand calcium-binding domain profile. 426 460 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3175 Sto-Chr6 38403541 38407287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3175 39 503 EF-hand Containing Proteins AT4G23650 81.505 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sto6g3175 Pkinase 6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3175 K13412 - gmx:100777096 876.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3175 6 38403541 38407287 Sto6g3175 6 38403541 38407287 ECH