Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3171 ATGAAAGGGAGTAGTGGTAGTGGAAAGAAGCAGACTGGTTCGTCGCCTTGTGCTGCGTGTAAGCTTCTTCGAAGAAGGTGTGATAAACAATGTGTGTTCGCTCCATATTTCCCAGCCCATCACCCTCACAAGTTCATTAATGTCCACAAAGTGTACGATGCCAGTAACGTCAACAAGATGCTTCAGAAGCTACCCGTACATCAGCGAGGAGACGCAGTGAGCAGTATGGTGTATGAAGCCAACGTGCGAGTGCAAGACCCAGTGTATGGGTGCGTTGGTGCCATCTCTTCTCTTCAGCACCAACTTGATGGGCTTCGGGCCCAACTGGCTCTGGCCCAGACCGAGGTGGCCACCTCAAGATGCTTCCTAGCCCAACCACTTGTGCCGCCTCGGTCTCACCACCATCGCCCAACATTTTCATGGACTCCGACTCACAACCCCAATCTATATTTGACATGGACCAACCCATCTATGATGATGATTCAATGTGGCCACGCTAGCTAG 504 0.5139 MKGSSGSGKKQTGSSPCAACKLLRRRCDKQCVFAPYFPAHHPHKFINVHKVYDASNVNKMLQKLPVHQRGDAVSSMVYEANVRVQDPVYGCVGAISSLQHQLDGLRAQLALAQTEVATSRCFLAQPLVPPRSHHHRPTFSWTPTHNPNLYLTWTNPSMMMIQCGHAS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3171 167 Coils Coil 95 115 - -
Sto6g3171 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 8 121 - -
Sto6g3171 167 Pfam Lateral organ boundaries (LOB) domain 16 113 IPR004883 -
Sto6g3171 167 ProSiteProfiles LOB domain profile. 15 116 IPR004883 -
Sto6g3171 167 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3171 Sto-Chr6 38367399 38368248 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3171 7 103 AS2 family AT1G31320 77.320 1.63e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto6g3171 LOB 6.5e-40 No_clan