Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3166 ATGATATCTGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAGGTTGAAGACCTTACATTGAGGTTGCAGCTGGAGAAACGCATGAGGGTTCACATGGAAGAAGCCAAaacacaagaaaataaaagattacAGTCTTCTTTGCATGAGATTCAACTTCAGTTTAAAGAAGCTAAGGCATTGCTTGAAAAGGACCGTGAGGCTGCGAAGAGGGCAGCAGAGATTGTGCCAAGCATAAAGGAGGTTCCAGTCATTGACCATGCATTGTTGGAGAAGCTTACTAGTGAAAATGAGAAACTCAAGACCCTGGTGTGTTCACTGGAAAAGAAAATTGGTGAAACGGAAAAGAGGTATGAAGAGGCAAACAAAATTAGTGGAGAAAGGTTGAAGCAAGCTATGGGGGCAGAATCAAAAATAATTCAGTTGAAGACTTCCATGCAAAGGCTTGAAGAGAAGTTCTCAAATATTGAATCTGAAAACCAAGTTCTGCAGTACCAACCTCTGAGAAACCCATCTGTTAAAAAGATGTCTGAGCACCTCTCTATTCCTGTAGCTGAGAAGCAGGAAAATGGTCACCCTGAGGTAGAAGAGCATAAAGCTGGTGCGAGTACTATTACTGAATCTCCTAGTGTGACACCGGTAAAGAAGTTTGGCACAGAATCTGATAGCAAATTGAGGAGATCATACACTGAGCGTCAACATGAGAATGTTGATGCACTTATCAATTGTGTTACTAAGAATATTGGGTTCACTCATGGAAAGCCTATAGCTGCAATTAGCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGGACTAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCTGCCATTGAGGTAAATGATAAGCATTTGCGCATGGAGACTCTTGGTGCTGATCATCCTTTACCGGTTAAAAAGATTTCTTCTTTGGCTGAAAAAACTAGTCCAAAAGTTGTTTTTAATGAAGTCCTAGCGACTGCTGGAAGGGACCTAGTAACAAAGGATATATCTAGGCTGCGTGGTGGCTGGCCAATGCAGGATGCGTTCTATGCATTTTCTCAGCACATGGCGCGGTCAGTTTTGTTCATTGAACATGTGATCTCTGTACTTAGCCAGACGCCTATCCTCAAAGGTGATGTAGATAGAGTTGAGGATAGCCATGTTTTTGACAGTCAGACAGAAGATGGTATGCTGCAAGCTGCAATTTTTGCTCTTACTGCTTTCTTCAGGTCTCTGCATTTGTATTGCCAAGTCGTGAAGCTGTGTCTGGGAGATAGGGTAATAATGTATCTTCCACGTTGTATGGACACGAATTCTGAAGTTAGAAAGATATCTGCTCAACTTCTTGTATATCTTCTGAACATAAGTACGGCTCTTTCTATGGCGATGGTATTATGTTCTCATGGAATCATGAATGGCAATATGACTGTTGGTGATTTGGTGACGGTGAATGGACTTCTCTTCCagctctctcttcctctcactTTCCTTGGTAGTGTATATCGTGAGACTGTGCAGAGTCTAGTCGACATGAAGTCCATGTTTCAGTTACTGGAGGTGGCGCCTGCAAAGGCACGAGACTTTGATGTCAACAGTCTGAGTTAtgGGGGCGCTTTCGACCTTGTTTATGATTTCCTTGGTTCATTTAAGTGGTCTTTTCTACCTTGGTCTGCTTGGGATAACTGCTTGTCTGAAGATGTGGCTTAA 1743 0.4131 MISAARETGALQAAKNKLEKQVEDLTLRLQLEKRMRVHMEEAKTQENKRLQSSLHEIQLQFKEAKALLEKDREAAKRAAEIVPSIKEVPVIDHALLEKLTSENEKLKTLVCSLEKKIGETEKRYEEANKISGERLKQAMGAESKIIQLKTSMQRLEEKFSNIESENQVLQYQPLRNPSVKKMSEHLSIPVAEKQENGHPEVEEHKAGASTITESPSVTPVKKFGTESDSKLRRSYTERQHENVDALINCVTKNIGFTHGKPIAAISIYKCLLHWKSFEAERTSVFDRLIQMIGSAIEVNDKHLRMETLGADHPLPVKKISSLAEKTSPKVVFNEVLATAGRDLVTKDISRLRGGWPMQDAFYAFSQHMARSVLFIEHVISVLSQTPILKGDVDRVEDSHVFDSQTEDGMLQAAIFALTAFFRSLHLYCQVVKLCLGDRVIMYLPRCMDTNSEVRKISAQLLVYLLNISTALSMAMVLCSHGIMNGNMTVGDLVTVNGLLFQLSLPLTFLGSVYRETVQSLVDMKSMFQLLEVAPAKARDFDVNSLSYGGAFDLVYDFLGSFKWSFLPWSAWDNCLSEDVA 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3166 580 Coils Coil 138 172 - -
Sto6g3166 580 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 460 518 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto6g3166 580 SUPERFAMILY ABC transporter transmembrane region 459 534 IPR036640 GO:0005524|GO:0016021
Sto6g3166 580 PANTHER MYOSIN-6-LIKE ISOFORM X1 4 300 - -
Sto6g3166 580 PANTHER MYOSIN 4 300 - -
Sto6g3166 580 Coils Coil 8 67 - -
Sto6g3166 580 MobiDBLite consensus disorder prediction 193 232 - -
Sto6g3166 580 MobiDBLite consensus disorder prediction 209 223 - -
Sto6g3166 580 Gene3D ABC transporter type 1, transmembrane domain 448 535 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3166 Sto-Chr6 38312462 38317451 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3166 4 303 Myosins gene family AT4G28710 57.947 1.65e-98 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3166 K10357 - gmx:100791070 433.335