Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3149 ATGAACGACGCAGATGTCTCCAAGCAAATCCAGCAGATGGTGAGGTTTATCCGCCAGGAAGCCGAGGAAAAAGCCAACGAGATCGGTGTCTCTGCTGAAGAAGTACGACTTAATTCCTTAACTTCAATTCTCTTTGCTTTCTCCATTCACGATTCCGATCTTTTTGTGTTCTCCTTTGAACTGCTGATCATTgatttacttGAATTCAACATCGAGAAGTTGCAGTTGGTTGAAGCCGAGAAAAAGAAGATCAGGCAAGAGTACGAGCGCAAAGAGAAGCAAGTCGAAGTTCGGAAGAAGATTGAGTACTCTATGCAGCTTAATGCTTCTCGCATAAAAGTTCTTCAAGCGCAAGATGATGTGGTTAATTCCATGAAAGATGCTGCGTCCAAGGAACTTTTGAATGTGAGTCATCACCACCATGTGTACAAACACCTTCTCAAAGATCTCATCGTTCAGAGTTTGCTGAGATTGAAAGAGCCTTCCGTCCTATTGCGGTGTCGGCAACACGACCTGCATTTGGTGGAGGATGTGCTGGATTCAGCTGCACAGGAGTACGCAGATAAAGCAAATGTTCATCCCCCAGAGATAATTATTGACAGGCAAATCTATCTTCCACCTGCACCCAGCCATCATGATACCCATGAGCTCTTCTGCTCTGGAGGTGTGGTGTTGGCTTCTCGAGATGGGAAAATTGTGTGTGAAAATACCCTTGATGCTCGATTGGATGTAGTGTTCCGTAAGAAACTTCCGGAGATTCGCAGGCAGCTGTTTGGACAAGTTGCTTGA 789 0.4487 MNDADVSKQIQQMVRFIRQEAEEKANEIGVSAEEVRLNSLTSILFAFSIHDSDLFVFSFELLIIDLLEFNIEKLQLVEAEKKKIRQEYERKEKQVEVRKKIEYSMQLNASRIKVLQAQDDVVNSMKDAASKELLNVSHHHHVYKHLLKDLIVQSLLRLKEPSVLLRCRQHDLHLVEDVLDSAAQEYADKANVHPPEIIIDRQIYLPPAPSHHDTHELFCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRRQLFGQVA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3149 262 Gene3D - 125 262 IPR038495 -
Sto6g3149 262 SUPERFAMILY V-type ATPase subunit E-like 120 259 - -
Sto6g3149 262 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 68 262 IPR002842 GO:0033178|GO:0046961|GO:1902600
Sto6g3149 262 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 34 IPR002842 GO:0033178|GO:0046961|GO:1902600
Sto6g3149 262 Hamap V-type proton ATPase subunit E [atpE]. 8 259 IPR002842 GO:0033178|GO:0046961|GO:1902600
Sto6g3149 262 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 68 262 - -
Sto6g3149 262 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 34 - -
Sto6g3149 262 Pfam ATP synthase (E/31 kDa) subunit 68 258 IPR002842 GO:0033178|GO:0046961|GO:1902600
Sto6g3149 262 Gene3D - 65 95 - -
Sto6g3149 262 Gene3D - 1 35 - -
Sto6g3149 262 Coils Coil 67 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3149 Sto-Chr6 38195889 38198715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3149 1 262 Primary Pumps ATPases(2) AT4G11150 68.702 4.65e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3149 K02150 - gmx:111064655 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3149 6 38195889 38198715 Sto6g3149 6 38195889 38198715 ECH