Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3146 ATGGAGGAGCTTCTACGCATTTTCTCTTGCGTTTTGTTTCTGGGTCTGATTTTCTTGCAAGCAAATGCAGAACCCATTGAAGATAAGCAAGCTTTGCTTGAGTTCGTCTCAAGATTTCCTCCCTCTCGCCCTCTAAACTGGGATGAGGCTTCTTCTGTGTGTACTAATTGGACTGGAGTTACTTGTAACGAAGACAAGTCTCGAGTAATAGCCGTACGATTGCCGGGGATCGGATTTCATGGAGAAATTCCGCAGAATACAATTAGTCGCCTCTCAGAACTTCAAATCTTGAGCCTCAGATCTAACCTTATTAGTGGCCGTTTTCCTTCTGATTTTTCTAATCTCAAAAACTTATCTTTACTGTTTCTTCAGTTCAACAACTTCTCTGGTTCTTTACCAGATTTCTCAGTTTGGAAGAATCTCACTGTTGTGAATTTGTCCAATAATCGTTTCAATGGAAGCATTCTTGCTTCCTCGTTCTCTAATTTAACTCTACTTGCTGGTTTGAATCTCGCAAACAATTCACTTTCTGGTGAAATCCCTGATCTCCACTTGCCAAGACTGCAACTTTTGAATTTGTCCAACAACTACCTAAACGGTTCTGTGCCTAGATCCTTCCAGAAGTTTCCCAGATCAGCATTCCTTGGTAACAACATTTCTCTAGAAACTTCTCCTCGCCCTTCTCCTGCTCTTCCTCCTGCTGATTCCTCACACCCATCTTCAAAACCCAAGAAGCATGGAAGAGGAAGACTCGGTGAGACAGCTCTGTTAGGGATTATAGCTGCTGCTGCTGTACTGGGTGTCATAGCATTTGGGTTTTTGATGTTTGTTTGCTTCTCAAGAAGAAGGGattatgaagaagaagatgggttCTCTGGGAAGTTGCAGAAGGGAGAAATGTCTCCTGAAAAAGCAGTTTCAAGGAATCAAGATGCAAATAACAAACTGGTTTTCTTTGAGGGATGTAACTATGCCTTTGACTTGGAGGATTTGTTAAGGGCTTCTGCTGAAGTACTGGGAAAGGGAACGTTTGGCACAGCATATAAGGCCATACTAGAGGATGCATCCACAGTTGTTGTGAAGAGGTTGAAGGATGTTGCTGCTGGGAAGAAGGAATTTGAGCAACACATGGAGACTGTGGGAAGTCTTAAACATGAGAATGTGGTTGAACTCAAAGCTTATTACTATTCCAAGGATGAGAAACTGATGGTGTATGATTACTACAGTCAAGGAAGCATATCTTCTTTGTTGCATGGTAAAAGAGGGGAGGACAGGGTGGCCCTAGATTGGGATGCTAGACTGAAAATAGCAGTGGGAGCTGCAAGAGGGATTGCTCGCATCCATGCTGAGAATGGAGGGAAGCTTGTACATGGAAACATCAAATCTTCGAACATCTTTGTCAACTCCAAACAGTATGGTTGTGTATCTGACCTTGGTTTAGCATTGATAATGAGCTCACTAGCCCTCCCAATCTCCCGCGCCGCCGGCTACCGTGCCCCGGAAGTCACCGACACGAGAAAAGCAGGACAGCCTTCAGATGTGTATAGTTTTGGTGTGGTATTACTAGAGCTTCTGACTGGGAAATCCCCCATACTCACGACAGGTGGGGATGAGATAGTGCATTTGGTGAGGTGGGTTCATTCGGTTGTGAGGGAAGAGTGGACGGCTGAAGTGTTTGATTTGGAGCTGATGAGATATCCAAATATAGAAGAAGAAATGGTGGAGATGTTACAGATAGCCATGTCATGTGTGGTGAGGATGCCTGATCAGAGACCTAAGATGGAAGAGGTTGTGAAGATGATAGAAAACGTGAGGCAGCTTGAAGCAGAAAATGTAATTAGTCAGACATCTGAGAAGAAAGATGAAACAATTGCtgcatcaccaccaccaccaccctcaCTGTTTCTTACTCAAcattaa 1920 0.426 MEELLRIFSCVLFLGLIFLQANAEPIEDKQALLEFVSRFPPSRPLNWDEASSVCTNWTGVTCNEDKSRVIAVRLPGIGFHGEIPQNTISRLSELQILSLRSNLISGRFPSDFSNLKNLSLLFLQFNNFSGSLPDFSVWKNLTVVNLSNNRFNGSILASSFSNLTLLAGLNLANNSLSGEIPDLHLPRLQLLNLSNNYLNGSVPRSFQKFPRSAFLGNNISLETSPRPSPALPPADSSHPSSKPKKHGRGRLGETALLGIIAAAAVLGVIAFGFLMFVCFSRRRDYEEEDGFSGKLQKGEMSPEKAVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDASTVVVKRLKDVAAGKKEFEQHMETVGSLKHENVVELKAYYYSKDEKLMVYDYYSQGSISSLLHGKRGEDRVALDWDARLKIAVGAARGIARIHAENGGKLVHGNIKSSNIFVNSKQYGCVSDLGLALIMSSLALPISRAAGYRAPEVTDTRKAGQPSDVYSFGVVLLELLTGKSPILTTGGDEIVHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMEEVVKMIENVRQLEAENVISQTSEKKDETIAASPPPPPSLFLTQH 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3146 639 SUPERFAMILY L domain-like 38 211 - -
Sto6g3146 639 Gene3D Phosphorylase Kinase; domain 1 299 407 - -
Sto6g3146 639 ProSitePatterns Protein kinases ATP-binding region signature. 339 370 IPR017441 GO:0005524
Sto6g3146 639 PANTHER OS05G0588300 PROTEIN 17 611 - -
Sto6g3146 639 MobiDBLite consensus disorder prediction 625 639 - -
Sto6g3146 639 PANTHER PROTEIN, PUTATIVE-RELATED 17 611 - -
Sto6g3146 639 Gene3D Transferase(Phosphotransferase) domain 1 409 627 - -
Sto6g3146 639 MobiDBLite consensus disorder prediction 223 248 - -
Sto6g3146 639 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Sto6g3146 639 ProSiteProfiles Protein kinase domain profile. 333 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3146 639 Pfam Protein kinase domain 336 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3146 639 SUPERFAMILY Protein kinase-like (PK-like) 337 601 IPR011009 -
Sto6g3146 639 MobiDBLite consensus disorder prediction 615 639 - -
Sto6g3146 639 Gene3D Ribonuclease Inhibitor 26 230 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3146 Sto-Chr6 38178416 38180880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3146 17 604 Receptor kinase-like Gene Family AT4G23740 66.556 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto6g3146 Pkinase 1.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3146 - - gmx:100814524 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3146 6 38178416 38180880 Sto6g3146 6 38178416 38180880 ECH