Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3129 ATGGACAACACATGGAGCTCAGAGCAGAACACACTCGCGACTGAGCTGATTCAGGGGATGGAGGTGGCTAGAAGGTTGAAAGCAGATTTAAAGTCACCATTATCTTCACTAGAGACGAGAGATTTGCTGATGCAGAAAATATTATCATCTTATGAAAAGGCTTTGCTCATTCTAAAATGGAAAACACCTGCTTTGCTGTTTCACCCAGACTCTCCCTTGTCTACCAACGACAATCCTCTCAGTCTAAGAGACGACCTTGATGGAGACCTCAAGGTTAAACCCGACTCAAAGAAAAGAAAGATGATGTCCAAATGGATGGATCAAGTTAGAGTGAGCTCTGACACTGGTCTTGAAGGGCCTCAAGATGATGGGTACAGTTGGAGAAAATATGGACAAAAAGATATCCTAGGTGCCAAATATCCCAGAAGTTATTATAGGTGCACCTTTCGTAATACACAAAGCTGTTGGGCCACGAAGCAAGTTCAGAGATCAGATGAAGACCCCACCATATTTGACATCACTTACCGAGGAAAGCATACTTGTTCCCTAGGAAATAACGTTGTTCTGCCTCCTATGTCCCCAGAGAAACAGGAGAAACCACATCATCATAAAACTAAAACGGATATCCAACACCAACAATATTATCCATCACAATTAGAAAGCCCAACAAATTTCGGAGATTACCAGGACATGGAATCTCCTTTTACTTTCCCTCCAACTTCCTTTGGATACATGTCGCAAGAAAACCATTGCTTACTTCCTTCGACACCAGAGAATGATTCCTTCTTCGGTAGCTTCTCGCAAACAGAGTTGGTATCCCCAAACACCCCAGAATCCAGCTATTTTCGATCTTTGTCTTTCAAGATGGACGAGTTCTTTGGCATCAATAACAAGCCTGGTTCAGAATCTGACATTACGGAGATCGTTTCAGCCAATACTTCAGCCACTAATTCTCCAATACTTGATTTCAATTTCCCCGTTGATCCAGTGGAAATTGACCCCAATTTTCCTTTTGATACCCCGAGACTTTTATCATAA 1038 0.4229 MDNTWSSEQNTLATELIQGMEVARRLKADLKSPLSSLETRDLLMQKILSSYEKALLILKWKTPALLFHPDSPLSTNDNPLSLRDDLDGDLKVKPDSKKRKMMSKWMDQVRVSSDTGLEGPQDDGYSWRKYGQKDILGAKYPRSYYRCTFRNTQSCWATKQVQRSDEDPTIFDITYRGKHTCSLGNNVVLPPMSPEKQEKPHHHKTKTDIQHQQYYPSQLESPTNFGDYQDMESPFTFPPTSFGYMSQENHCLLPSTPENDSFFGSFSQTELVSPNTPESSYFRSLSFKMDEFFGINNKPGSESDITEIVSANTSATNSPILDFNFPVDPVEIDPNFPFDTPRLLS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3129 345 SUPERFAMILY WRKY DNA-binding domain 120 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g3129 345 Pfam WRKY DNA -binding domain 122 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g3129 345 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g3129 345 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 341 IPR044810 GO:0003700
Sto6g3129 345 Gene3D WRKY domain 107 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g3129 345 ProSiteProfiles WRKY domain profile. 116 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g3129 345 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3129 Sto-Chr6 38102733 38103993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3129 8 337 WRKY Transcription Factor Family AT4G11070 39.104 8.33e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto6g3129 WRKY 1.8e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3129 6 38102733 38103993 Sto6g3129 6 38102733 38103993 ECH
Sto6g3129 6 38102733 38103993 Sto9g2780 9 29531052 29532229 ECH
Sto6g3129 6 38102733 38103993 Sto6g1131 6 10856260 10876377 ECH