Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3128 ATGGATAATCAGAAGAAGAATCGTGGAAAACCGACATCCTCTGAAGAAGTGAGCAGTAGTGAGTGGGAAATCATAGAGATGAGCCAGCAAGAGGAGGATCTCATCCAAAGGATGTACACCCTCGTCGGCAACAGGTGGGATTTGATAGCGGGACGCATCCCAGGTCGTAAAGCAGAAGAGATTGAGAGATTCTGGATAATGAGACATGCTGATACTCATGCTTCTGGTGTTAGAAGATCAAGTGAACATAAACCCAAACACTCgtga 267 0.4494 MDNQKKNRGKPTSSEEVSSSEWEIIEMSQQEEDLIQRMYTLVGNRWDLIAGRIPGRKAEEIERFWIMRHADTHASGVRRSSEHKPKHS 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3128 88 CDD SANT 26 65 IPR001005 -
Sto6g3128 88 Gene3D - 27 88 - -
Sto6g3128 88 SUPERFAMILY Homeodomain-like 28 75 IPR009057 -
Sto6g3128 88 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 1 75 - -
Sto6g3128 88 Pfam Myb-like DNA-binding domain 28 66 IPR001005 -
Sto6g3128 88 MobiDBLite consensus disorder prediction 1 22 - -
Sto6g3128 88 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 75 - -
Sto6g3128 88 SMART sant 23 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3128 Sto-Chr6 38097522 38099756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3128 27 65 MYB Transcription Factor Family AT5G52600 61.538 1.11e-12 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto6g3128 Myb_DNA-binding 6.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3128 K09422 - pop:7489814 97.0561