Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3090 ATGGAAGCTGAAACCAAAGGAAGAATCGAAAGCACAGTTCGGAGAATTCTGGAAGAATCAGACATGGATCAGGTCACCGAGTCCAAGATCAGGAAGCAAGCCGCCAAAGAGCTCGACCTCGACCTATCGCAGCCCAATTACAAAGCTTTCGTGAAGCAGGTTGTGGAGTCCTTTCTTCAGGAAAAGCAAGacgaagaagaggaggagcagCAGCAACCGCAAGAGGAAACTGTCCAGGATCAGGATTACGATGAAAATGGCGATCTCATAATCTGCAAGCTTTCAGACAAGAGAAGGGTTACGATTCAAGAGTTCAGAGGGAGAAAGCTGGTCTCTATCCGTGAGTTCTATAGTAGGGGTGGCAAAGAACTTCCTTCTTCCAAAGGAATAAGTTTGACAGAGGAGCAATGGTCAGCCTTCAAGAAAAACATGCCTGCCATTGAAAAAGCCATTGAGAAAATGGAGGCATACTAA 474 0.4388 MEAETKGRIESTVRRILEESDMDQVTESKIRKQAAKELDLDLSQPNYKAFVKQVVESFLQEKQDEEEEEQQQPQEETVQDQDYDENGDLIICKLSDKRRVTIQEFRGRKLVSIREFYSRGGKELPSSKGISLTEEQWSAFKKNMPAIEKAIEKMEAY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3090 157 PIRSF RNA_polymII_KELP 1 157 IPR017415 -
Sto6g3090 157 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 3 155 - -
Sto6g3090 157 Gene3D - 2 63 - -
Sto6g3090 157 Pfam Transcriptional Coactivator p15 (PC4) 92 143 IPR003173 GO:0003677|GO:0006355
Sto6g3090 157 Gene3D Transcriptional Coactivator Pc4; Chain A 81 156 IPR009044 GO:0003677|GO:0006355
Sto6g3090 157 SUPERFAMILY ssDNA-binding transcriptional regulator domain 91 153 IPR009044 GO:0003677|GO:0006355
Sto6g3090 157 Pfam DEK C terminal domain 5 59 IPR014876 -
Sto6g3090 157 SUPERFAMILY DEK C-terminal domain 5 60 - -
Sto6g3090 157 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 155 IPR045125 GO:0003713|GO:0060261
Sto6g3090 157 MobiDBLite consensus disorder prediction 61 83 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Sto6g3090 DEK_C 4.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3090 K25815 - fve:101295417 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3090 6 37884622 37886066 Sto6g3090 6 37884622 37886066 ECH