Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3075 ATGGGTTCGGCTCTTAGGAATTCTCTCAAATTCCTTTGTTCTTCTCATGGCTGGTCTTACGCCATTTTCTGGCGCTTTCATCCTCTCAATTCCTTCATCATTGATTCATTCGATGTTAGGTTGTTGACTGTGGAAGATGCTTACTACCAAGACCAATTGGGACAAGAGATTGCTAATTTATTGCTCCCACAAGTCCATTTTCTGGGTGAAGGAGTTGTTGGTGAAGCTGCTTTCACTGGCAAGCACAGATGGATGCTCTCAGATTTTCAAACCCAAGAATGGAATTTCACAGGTGCTTTTGGAAATCAAGACCATTCTGAATTGCATCAACTATTCTCCTTTGGGATAAAGACAATTGCAGTAGTATCTGTCAAACCATGGGGTGTAGTACAATTTGGATCCACACAGAAGATCTTGGAAAGAGAAGAGTTTTTGGAACAAACACAAAGACTTCTTCTCATGGGGACAGAACATGTGGATATGCTTGAAGCATCATCATCAGAAACTCCAGTTTTCCCATTGGATTGTGAGAATAATTATGATCTGAATGGCTATGAAAATTTGTGTTACTTGAAAGAAGCTTCTTGTCTCACAGATAGTACTAGTTTTGATGTGCTTTTGGATCCCAACCCTTGTTTTGTTGAGACATTTAGTGGTGAAGTTTCTGGTTTGGGTTCTTCAAGTTCAACATTGACCTCTAGCTTTGATGATTTCCCAGAAGATTTAAGTAAGCTCGAAGGGCTGTGTTCTTCAGTGGTGTGGGAGGATTTTTCTGAGTTGTGTTCTGTGGATGATCTTTGTCAGTGGTTTTCTCCTTCCTCAGATAGTACTACTACCTTCAGTACTGCATTAATGGAAGATTCCCTTTCTCAATCCATAGAATTTGCTTATCCAGTCACTACGGCGAAACCGGCTAGTTCTTCATCCGAAAGCAAATCAGAGTTGACTTCTGGCACAAGAAAGAAGGGATTGTTTTCAGAGCTGGGAATTGAGGAGCTTTTGAAGGGTGGAAGTGGAAGATCAAGTTTTGAGGATGAGATATCTAGAGCTAAAAGGAGAAGAATGGACTATTCTTCTTCACCTGTGAATACTACTAATCCTCATAGTCTTGTGCACTGGAATGAGATCAATTATGGTCATAGCATCAATGGTGGGATTGGGAGGATTGTCCCTCAGAAGCCGGAGGAACCCGCAAAGACGGCCTCCCGGAAGAGGGCTAGGCCGGGAGAGAGCACTCGGCCCCGACCGAAAGATCGTCAGCAAATCCAAGACCGTATTAAAGAGTTGAGAGGGATCATTCCTAGTGGTGGAAAGTGTAGCATTGATTCTTTGTTGGATCGAACCATCAAATACATGCTTTTCTTACAAAGCATCACAAAATATGCAGACAAGCTGCAAGAGCCCAAGAATCCCAAGCTCATTGAAAAGGCAAATGGTGTGGGAGAAGGAGAGAAAgaagatggtggtggtggtggtgctaCATGGGCATTTGAAGTTGCAGGTCAAACAATGGTATGCCCAATTGTAGTTGAAGACATGAGCTCACCAGGTCAAATGCTCATAGAGATACTTTGTGAGGAGCAGGGCTTGTTCCTAGAGATAACAGAGATAATTCGGGGTTTCGGATTGAATATCTTGAAAGGAACCATGGAAATTAGGGAGAATAAGTTATGGGGACGCTTTATTGTTGAGGCAAAGAGACCTGTGACGAGGATAGATGTATTCTGGTATCTGGTGCAGCTTCTGCAGCAGCAAACAAACACCTCTGGAACCGGAATGGATAGTTATCAGGAGCAAGATATGCCACTTCCCGTGATGGGGATAgcagaatga 1833 0.4201 MGSALRNSLKFLCSSHGWSYAIFWRFHPLNSFIIDSFDVRLLTVEDAYYQDQLGQEIANLLLPQVHFLGEGVVGEAAFTGKHRWMLSDFQTQEWNFTGAFGNQDHSELHQLFSFGIKTIAVVSVKPWGVVQFGSTQKILEREEFLEQTQRLLLMGTEHVDMLEASSSETPVFPLDCENNYDLNGYENLCYLKEASCLTDSTSFDVLLDPNPCFVETFSGEVSGLGSSSSTLTSSFDDFPEDLSKLEGLCSSVVWEDFSELCSVDDLCQWFSPSSDSTTTFSTALMEDSLSQSIEFAYPVTTAKPASSSSESKSELTSGTRKKGLFSELGIEELLKGGSGRSSFEDEISRAKRRRMDYSSSPVNTTNPHSLVHWNEINYGHSINGGIGRIVPQKPEEPAKTASRKRARPGESTRPRPKDRQQIQDRIKELRGIIPSGGKCSIDSLLDRTIKYMLFLQSITKYADKLQEPKNPKLIEKANGVGEGEKEDGGGGGATWAFEVAGQTMVCPIVVEDMSSPGQMLIEILCEEQGLFLEITEIIRGFGLNILKGTMEIRENKLWGRFIVEAKRPVTRIDVFWYLVQLLQQQTNTSGTGMDSYQEQDMPLPVMGIAE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3075 610 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 56 150 IPR025610 -
Sto6g3075 610 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 406 455 IPR011598 GO:0046983
Sto6g3075 610 MobiDBLite consensus disorder prediction 336 366 - -
Sto6g3075 610 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 419 461 IPR036638 GO:0046983
Sto6g3075 610 MobiDBLite consensus disorder prediction 384 422 - -
Sto6g3075 610 MobiDBLite consensus disorder prediction 397 422 - -
Sto6g3075 610 MobiDBLite consensus disorder prediction 338 356 - -
Sto6g3075 610 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 185 IPR043561 GO:0003700|GO:0006355
Sto6g3075 610 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 311 589 IPR043561 GO:0003700|GO:0006355
Sto6g3075 610 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 311 589 - -
Sto6g3075 610 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3075 Sto-Chr6 37750712 37753642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3075 376 607 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.271 1.25e-67 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3075 - - soe:110796447 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3075 6 37750712 37753642 Sto6g3075 6 37750712 37753642 ECH