Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3073 ATGGATTCCGGTACTAGTTTGTCTGTTGGCAAGTGTGGGATAGAGGATTTTGATGGTGCGGAGAGAGATCCAACGGGGCGATACATCCGGTATGATGATATGTTGGGGAAAGGAGCATCCAAGACTGTaTATAAGGCATTTGATGAAGTTGATGGGATAGAAGTCGCCTGGAATCAAGTAAATATTGAGGATGTTCTGGAGTCTCCGCAACAATTGGAAAGATTATATTCTGAGGTGCATCTCCTGAAGTTATTGAAACATGAGAACATCATCAAGTTCTATAATTCATGGGTGGATGATACAAGCAAAACTATCAACATCATAACTGAGTTATTCACGTCTGGTAGTTTGAGGAAATATCGAAGGATGCATAAGAATGTTGATATGAAGGCCATCAAGAACTGGGCTAGGCAAATTCTTCGAGGTTTATGCTATCTGCATAGTCACAGTCCTCCTATAATCCATAGAGATTTGAAATGTGACAACATTTTTATTAATGGTAATAATGGAGAAGTTAAGATTGGAGATCTTGGATTGGCTATTGTTATGCAGCAGCCTACTGCCCGGAGTGTCATTGGGACGCCAGAATTCATGGCCCCTGAGCTTTATGAAGAAGAATACAATGAACTTGTTGACATATATTCTTTTGGCATGTGTATGTTAGAAATGATCACCTGTGAGTACCCGTATAGTGAATGTAAAAATTCAGCTCAGATATATAAGAAAGTTATCTCTGGTATCAAGCCTGCTTCCCTTTCTAAAGTGAATGATCCACAAGTGAAGCAATTCATTGAGAAGTGTTTAGCTGAAGCATCTGTGAGATTGTCTGCTTCCGAACTATTGAAGGATCCATTTCTCTCTGTTGACAACATAAAAGAGATCAATCATACATTGCCGTTGCCTGATCCTACAACCAAATCGGTGACTTCACAAGTATCAGAGCCTCGTTCCATGGAGATAGACCCTAACTCCTGTGTGAAAGTTCTTGAAGAAACTTCTGTCTCAACCTTAGAATTGCTGGGGAGAAATGAGACTAATGAAATCAAGTTAATAGGAGAGAAAAATCCTGCAGACAGGACAATTAAATTAGATCTGCTCATTGTTGATGCAAATGGTCGTGCAAGGAATTTCCACTTTCCATTCTATCTTGATTCTGATACAGAAATTTCAATAGCTGAGGAGATGGTAGAACATCTGGATCTTACTAACGAGGATGTGAGAGTTTTTGCTGAACTCCTAAGCAATATGATTGTTAGGCTCTTCCCCAACTGGAGTGGGCCACAACAATGTCAATCATCTGGAGAAGATCTTTTATATGGGCAATCTCCAGTAGTTCTTGATGATGGAGCAGCTTTAAGGTGCCATATTAACGAGGATCTTGTTCACTCACAGCTTGCTGAAGCAGACAATCCAGATAAACAAATATCAGCGATGTCAGATATTTCATCAGAGTATGGGATTACAATCACCTCACATGCTAAAAGCATAGACCCTGATTATTCTGTCTTTGATGAATGCTGTGAGGGTTCCAATGGAAACAGTTACAATTTGAATGCCAGATTATATGAACAAGATGGATGCAAGAGACAAACTAATGGTGTTAAGGCTGAGTCAGAGGAGAACTCAGCTGTCTCCTGTATTGATTCATGTGGCGATGTAACCCAAAACCTCGACATGTCAAGCCTCTGTTCTCTTTCTCTGGAAGACAATGATCAATCAGGCGAGCTGCAGCTAGAGCTTGATGCCATAAATATTCAGTATCAACAGTGTTTTCTTGAGCTTCTGAAAATGAGGGAGGATGCCATAGAAAACGCAAAAAGAAGATGgataataaagaagaaaatgccTGTTGTGTGA 1857 0.3969 MDSGTSLSVGKCGIEDFDGAERDPTGRYIRYDDMLGKGASKTVYKAFDEVDGIEVAWNQVNIEDVLESPQQLERLYSEVHLLKLLKHENIIKFYNSWVDDTSKTINIITELFTSGSLRKYRRMHKNVDMKAIKNWARQILRGLCYLHSHSPPIIHRDLKCDNIFINGNNGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMITCEYPYSECKNSAQIYKKVISGIKPASLSKVNDPQVKQFIEKCLAEASVRLSASELLKDPFLSVDNIKEINHTLPLPDPTTKSVTSQVSEPRSMEIDPNSCVKVLEETSVSTLELLGRNETNEIKLIGEKNPADRTIKLDLLIVDANGRARNFHFPFYLDSDTEISIAEEMVEHLDLTNEDVRVFAELLSNMIVRLFPNWSGPQQCQSSGEDLLYGQSPVVLDDGAALRCHINEDLVHSQLAEADNPDKQISAMSDISSEYGITITSHAKSIDPDYSVFDECCEGSNGNSYNLNARLYEQDGCKRQTNGVKAESEENSAVSCIDSCGDVTQNLDMSSLCSLSLEDNDQSGELQLELDAINIQYQQCFLELLKMREDAIENAKRRWIIKKKMPVV 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3073 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Sto6g3073 618 PANTHER WNK KINASE 16 613 - -
Sto6g3073 618 SUPERFAMILY Protein kinase-like (PK-like) 23 316 IPR011009 -
Sto6g3073 618 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3073 618 Pfam Protein kinase domain 33 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3073 618 Gene3D Transferase(Phosphotransferase) domain 1 112 293 - -
Sto6g3073 618 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g3073 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 16 613 - -
Sto6g3073 618 Gene3D Phosphorylase Kinase; domain 1 15 110 - -
Sto6g3073 618 CDD STKc_WNK 27 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3073 Sto-Chr6 37740126 37742915 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3073 1 617 MAP Kinase Kinase Kinase AT5G41990 51.858 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sto6g3073 Pkinase 8.2e-53 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3073 6 37740126 37742915 Sto6g3073 6 37740126 37742915 ECH