Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3052 ATGCCGAATGAAAGCACAAATGGAGATGGTGTCGCGGGTGGAGTTGATGTGCCCGGAATTGAGAAGCAGGGCCTTCGAGAAAGTAGCTTACgtggcggcggtggtggtgaGGAGGAAGCAATAACAATTGCGGTTTCTCCAAGTAAGGGCTACTTGTCTAGGTCTGGAAGTTCCCAAGAACAATGCAGAATTTGTCagcaagaaaaagaagaaagtctGATAGATCTTGGATGTCAATGTCGAGGTGGACTAGCGAAAGCACACCGAACATGCATAGAAACTTGGTTTCGTACGAGAGGATCAAACAATTGTGAGATCTGCCAGGAAGTAGCTCAGAATGTGTCACCTCCAGAATCCCAGCCAAATCAGACTGATTACTGGGTATGGAGGATTGACCCAACAATTAGGGCACAGGATCGTGAAAGGGGCTGTTTTAGTCCTCTTTGGGTGGCATTTTCAATTCTCATTGGCGGTCTCTTGTTGGATGTGCTCATATCCATCACCTTTGGTGTCTCTGCACTTCCTGTAAATATAATAATCGGTGTTATCATTGTGCTAGGACTCGGCACTGCTCTCCGGCTGGCCTTGGAATTCTGCCATGAGTGGAGTTTGAGGAGAGCTGTGCAAAGAGTGGAAGCAAATGTGAATCATGGGTTTCACCCTGCTTTGTAA 672 0.4405 MPNESTNGDGVAGGVDVPGIEKQGLRESSLRGGGGGEEEAITIAVSPSKGYLSRSGSSQEQCRICQQEKEESLIDLGCQCRGGLAKAHRTCIETWFRTRGSNNCEICQEVAQNVSPPESQPNQTDYWVWRIDPTIRAQDRERGCFSPLWVAFSILIGGLLLDVLISITFGVSALPVNIIIGVIIVLGLGTALRLALEFCHEWSLRRAVQRVEANVNHGFHPAL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3052 223 MobiDBLite consensus disorder prediction 1 40 - -
Sto6g3052 223 CDD RING_CH-C4HC3_MARCH 62 108 - -
Sto6g3052 223 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 111 IPR013083 -
Sto6g3052 223 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH11 ISOFORM X1 37 222 - -
Sto6g3052 223 PANTHER ZINC FINGER, RING-CH-TYPE 37 222 - -
Sto6g3052 223 Pfam RING-variant domain 62 107 IPR011016 GO:0008270
Sto6g3052 223 ProSiteProfiles Zinc finger RING-CH-type profile. 54 114 IPR011016 GO:0008270
Sto6g3052 223 SUPERFAMILY RING/U-box 57 110 - -
Sto6g3052 223 SMART ringv_2 61 108 IPR011016 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3052 59 114 C3H Transcription Factor Family AT2G37950 52.542 3.43e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3052 - - pvy:116133177 306.99