Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3044 ATGTGGAGCTCTGAGTTCCGAGTTTGGACTAAGGGTTGCATTTCGTTGGTGTTTATTTCTGCAATTTCTGCTGCTTTATCTCTGGAACCCGAACTCGGATCGTCCCGTGTCGTCTTTCAGACGAATTACGGGGATATTGAATTTGGGTTCTATCCCACTGTTGCACCCAAAACCGTCGATCACATTTTTAAACTTGTGCGACTTGGATGCTATAATACAAATCATTTCTTCCGGGTAGATAAGGGCTTTGTGGCCCAGGTAGCAGATGTTGTCAATGGAAGATCTGCTCCCATGAATGAAGAGCAAAGAAGAGAAGCTGAGAAGACTGTTGTTGGTGAATTTAGCCAAGTCAAACATGTAAGAGGCATTCTTTCTATGGGAAGGCATAGTGACCCAGACAGTGGTGGATCCTCATTTTCAATGCTTCTAGGAGATGCTCCTCATCTTGATGGCCAGTATGCAATATTTGGAAGAGTTACCAAAGGTGATGATACATTGAAAAAGCTCGAACAACTACCTACTCGCACAGAGGGCATTTTTGTAATGCCAACAGAGCGTATCACTATTCTGTCTTCTTATTACTATGACACTGAGAGTGAGGATTGTGAACGAGACAGATCGATTTTAAAGCGCAGGCTAGCTTCATCGGCTGTTGAAATCGAAAGACAGAGAATGAAATGCTTCCCCTGA 690 0.4348 MWSSEFRVWTKGCISLVFISAISAALSLEPELGSSRVVFQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVVNGRSAPMNEEQRREAEKTVVGEFSQVKHVRGILSMGRHSDPDSGGSSFSMLLGDAPHLDGQYAIFGRVTKGDDTLKKLEQLPTRTEGIFVMPTERITILSSYYYDTESEDCERDRSILKRRLASSAVEIERQRMKCFP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3044 229 CDD cyclophilin 38 191 - -
Sto6g3044 229 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 38 194 IPR002130 GO:0000413|GO:0003755
Sto6g3044 229 Gene3D - 26 203 IPR029000 -
Sto6g3044 229 SUPERFAMILY Cyclophilin-like 34 196 IPR029000 -
Sto6g3044 229 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 191 IPR002130 GO:0000413|GO:0003755
Sto6g3044 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 65 IPR002130 GO:0000413|GO:0003755
Sto6g3044 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 IPR002130 GO:0000413|GO:0003755
Sto6g3044 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Sto6g3044 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 151 166 IPR002130 GO:0000413|GO:0003755
Sto6g3044 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 10 229 IPR044233 -
Sto6g3044 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 10 229 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3044 37 195 U-box Gene Family AT5G67530 28.743 3.93e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3044 - - gmx:100819238 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3044 6 37506768 37512362 Sto6g3044 6 37506768 37512362 ECH