Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3040 ATGCCTATTGATGGTGATGGATTCAGGGGCATATCAGTCTTTTCGGCTAGAATTCCATCAGATAATGACTACAACTTTGATCATTCCAATGGGATTCGCAGGCCCAATTTCCCATTGCAACTTTTAGAGACTAAACATGATCTTTTGCCTTCCTCCGCCGCCGCCGACGACCTTTGCTCGCCGCCGGACCCACCCAAGAAGCCGCCTCCCAAGCGCGCCTCCACCAAGGACAGGCACACCAAGGTCGACGGCCGTGGCCGCCGGATCCGCATGCCGGCCGCCTGCGCCGCCAGGGTGTTTCAGCTCACCAGAGAGCTCGGCCATAAGTCCGACGGCGAGACCATCGAGTGGCTGTTGCAGCAGGCGGAGCCCGCCGTGATTGCCGCCACCGGCACCGGGACGATCCCGGCGAATTTCACCTCGCTTAACATCTCGCTCCGCAGCTCCGGCTCCACCATGTCGGCGCCGTCGCACTACTTCAGGAGTGGTAACTACTTCAGCCCGGCCGGATTCTCCGCGGCGGCTGCGGCGGCGATGCAGTTGAGGAGTCGGAGCGAGTGGGAGAGGAGCGTGCAGGTCGTGGATGATTCTAGAAGGATCTCGTTTCCTAATTCGTCGACGGAGAATAATTCTCCTGTGTCTACGCttctgaatttcaacaataattCCTCCAATGGCAACAATATTCCACAAGCGAAGCCGGAGCTCCGGGAAGAtcccgccgccgccgccacaaCAGAGGAATCAGAGCAGAGCAGCTtgggaagaaagagaagagCAGAACAGGAGCTCTCACAAACCCATCAGATTGGAAATTATCTGTTACAATCCACCACCGGTTCAATTCCGGCGAGCCACGCCTCCATCCCGGCGACGTTTTGGGCAATGGGCAACGGCGGAGGAGGAAACAGCGGGGATCCAATTTGGGCGATTCAGTCTAGTGGCAACAATAGTAATATGAATATGTACAGGGGGGCAATGTCGGCAAGTGGAATTCACTTCATGAATTTTGCTTCTCATCATCATCCATTGATGCCTCTCATGGCAGGTTCAGGAAACAACACAATGTTGCCTCCTGAAAGCAACTTAGGCATGCTTGCAGCCTTCAATGCGTATAGGCCGATTCCGCCCAACGGCGCCTTGCCGGAGTCGGAGGCGGCGGCAGCCGCCAGTAGCCAGCAGAATCACCCACATCACGGCGGAGATGGTCATGAAGCAACTAGTGGCCAACATTAA 1236 0.538 MPIDGDGFRGISVFSARIPSDNDYNFDHSNGIRRPNFPLQLLETKHDLLPSSAAADDLCSPPDPPKKPPPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRSGNYFSPAGFSAAAAAAMQLRSRSEWERSVQVVDDSRRISFPNSSTENNSPVSTLLNFNNNSSNGNNIPQAKPELREDPAAAATTEESEQSSLGRKRRAEQELSQTHQIGNYLLQSTTGSIPASHASIPATFWAMGNGGGGNSGDPIWAIQSSGNNSNMNMYRGAMSASGIHFMNFASHHHPLMPLMAGSGNNTMLPPESNLGMLAAFNAYRPIPPNGALPESEAAAAASSQQNHPHHGGDGHEATSGQH 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3040 411 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 65 411 IPR005333 GO:0003700
Sto6g3040 411 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 65 411 - -
Sto6g3040 411 MobiDBLite consensus disorder prediction 52 85 - -
Sto6g3040 411 MobiDBLite consensus disorder prediction 200 231 - -
Sto6g3040 411 MobiDBLite consensus disorder prediction 69 85 - -
Sto6g3040 411 ProSiteProfiles TCP domain profile. 75 129 IPR017887 -
Sto6g3040 411 Pfam TCP family transcription factor 74 268 IPR017887 -
Sto6g3040 411 MobiDBLite consensus disorder prediction 379 411 - -
Sto6g3040 411 MobiDBLite consensus disorder prediction 200 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3040 Sto-Chr6 37435253 37438718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3040 34 144 TCP Transcription Factor Family AT1G69690 80.357 1.12e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto6g3040 TCP 3.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3040 - - gmx:100809966 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3040 6 37435253 37438718 Sto6g3040 6 37435253 37438718 ECH