Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3031 ATGGAAGAGAGAAGTGATTCTGCAGAGAAGCTAGATGAAGTTATGCTGCCAGGCTTCAGGTTTCACCCTACTGATGAGGAGCTTGTGGGGTTTTATCTTAAGAGAAAGATTCAGCAGAGACCTCTCTCTATAGAGCTCATTAAGCAGCTTGATATCTATAAGTATGATCCATGGGATCTTCCAAAGCTGGCAAGTACAGGTGAGAAAGAGTGGTATTTCTACTGTCCTAGAGACAGAAAGTATAGGAATAGTGCAAGGCCTAATAGAGTAACAGGAGCTGGGTTCTGGAAAGCCACAGGCACTGATAGGCCCATATACTCCTCTGAGGGTAATTCCAAGTGCATTGGCCTGAAGAAATCCTTGGTTTTCTACAAAGGAAGAGCAGCCAAAGGGATCAAAACTGACTGGATGATGCATGAGTTCAGACTTCCCTCTCTCACTgactcttcatcttctcccaaAAAGTACATAGAAAAGACCATCCCTGCCAATGACTCATGGGCAATCTGCAGAATATTCAAGAAAACCAATTCTACAGCTCAAAGAGCTCTCTCTCACTCATGGGTCTCTCCCTTACCTCATGAAATGAACAACACTTGTCATCATCATGAAATGCTAACCAAAGAAGAAGACAGTAACACCCAGTTTTGTTCATCAGATCATCACAGCAATATTATGACAAAGAAAACCAGCTTAGCCAACAACCAGTTCTGTACTAACCAAAATGACCACttaaccaccaccaccacaaccaCTAATACCACTCTTTCTCCTCTAGATGTTGCCTCTTACAAACCCATTCTTAACCCATTATTACTCTACAAACCCTTTGACCAAATACCCATCATTTCAAATAATGGAGACCTCATGTTCCCACCATCTCCTCTTGAACCATCCAAATCCACCCCCATGGATGTCTCTTCAATGCTATTGAGCATGTCATCTTCTGTGCTTGGAGATTATGGTACTACTACCACCACTAAGGCCTCATCAGAAGGTGCAAATTTTGGAGGGTTCATTCAAGagcaatataataataatgggtATTCAACAATAGCTTTACCATTAATCCAAGATGGTAATAATCATTTGGTTAATGGTAATGTgaatgtgatgatgatgatgcctAGAATAGTGGATGAACAAGTTCAAATGGAGGCACTAGGAAGATCCAAcaatagtaatagtaatatGAATAATGGGTTTGGATTAGGCAGTAGTGGTATGCCTAATTTGAATATTGGGGATGCATGGAAGTCAAATCTGCTTTGGGATAGTTCATCTTGTCCTTGTGATCATGTGCCCTCAACTTATTCAACAACCAAGTGCTATACTTAA 1338 0.3819 MEERSDSAEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGNSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLTDSSSSPKKYIEKTIPANDSWAICRIFKKTNSTAQRALSHSWVSPLPHEMNNTCHHHEMLTKEEDSNTQFCSSDHHSNIMTKKTSLANNQFCTNQNDHLTTTTTTTNTTLSPLDVASYKPILNPLLLYKPFDQIPIISNNGDLMFPPSPLEPSKSTPMDVSSMLLSMSSSVLGDYGTTTTTKASSEGANFGGFIQEQYNNNGYSTIALPLIQDGNNHLVNGNVNVMMMMPRIVDEQVQMEALGRSNNSNSNMNNGFGLGSSGMPNLNIGDAWKSNLLWDSSSCPCDHVPSTYSTTKCYT 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3031 445 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 443 - -
Sto6g3031 445 PANTHER PROTEIN FEZ ISOFORM X1 1 443 - -
Sto6g3031 445 Pfam No apical meristem (NAM) protein 17 143 IPR003441 GO:0003677|GO:0006355
Sto6g3031 445 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
Sto6g3031 445 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Sto6g3031 445 SUPERFAMILY NAC domain 14 175 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3031 Sto-Chr6 37353316 37355096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3031 2 271 NAC Transcription Factor Family AT1G26870 62.324 2.88e-112 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto6g3031 NAM 3.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3031 - - gmx:100783995 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3031 6 37353316 37355096 Sto6g3031 6 37353316 37355096 ECH