Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3030 ATGGTTCAGCGTCTTACCTACCGCAAACGCCATAGCTATGCCACCAAATCCAACCAGCACAGGGTTGTGAAAACCCCTGGTGGGAAGCTTGTTTATCAGACCACTAAGAAGAGGGCAAGCGGTCCCAAGTGCCCTGTTACTGGCAAGAGGATTCAGGGGATTCCCCACTTAAGGCCTGCAGAGTATAAGAGATCAAGGTTGCCTAGAAACCGAAGGACTGTGAACCGTGCTTATGGCGGTGTTTTGTCTGGTGGTGCTGTTAGAGAAAGGATTATTCGAGCCTTTTTAGTTGAAGAACAAAAGATTGTGAAAAAGGTGTTGAAGATCCAGAAGGCAAAGGAAAAGCAAGCCTCGAAGGCATGA 363 0.4793 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASKA 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3030 120 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Sto6g3030 120 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Sto6g3030 120 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Sto6g3030 120 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
Sto6g3030 120 PANTHER - 1 120 - -
Sto6g3030 120 Gene3D - 39 120 - -
Sto6g3030 120 PANTHER 60S RIBOSOMAL PROTEIN L34 1 120 IPR008195 GO:0003735|GO:0005840|GO:0006412
Sto6g3030 120 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
Sto6g3030 120 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Sto6g3030 120 Gene3D - 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3030 Sto-Chr6 37343553 37345468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3030 1 119 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 91.597 1.10e-75 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3030 K02915 - gmx:100785061 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3030 6 37343553 37345468 Sto6g3030 6 37343553 37345468 ECH