Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto6g3024 | ATGAGCGATCATTTGGTGCTGTATGTCGATCGTCTCGTACGCCCTGTGCCTGTTGAGTCGGTGACGGAGCCGGCCCAGTTGGTTCCCGACTTGTCTCAGGCTGGGAAGTCTGTGGATGTGCCGGGCCCCTCCGGTTCTGCACCGCCGGCGGACGATGACGCTAGGTCGGAGCACGATGAGGGTGGTGGTGAGGATGAGCCGCTGGTCCCGAGCGCGGAGTGTCGTATTTGTCAGGAGGAAGACACTATTAACAATTTAGAAACGCCTTGCGCCTGCAGCGGCAGTCTGAAGTATGCTCATCGAAAGTGCGTGCAGCATTGGTGCAATGAGAAAGGAGACATAACTTGTGAGATCTGTCATAAGCCTTATCAGCCTGGTTATATTGCCCCACCTCCTCGTCCTCATGCTGAAGAAACTACCATTGATATAGGTGGAGGCTGGACAATCTCTGGTGCACCTTTGGACTTGCGTGATCCACGACTCTTGGCAATTGCAGAGGCTGAACGACAATTCTTGGAAGCTGAATATGATGAGTATGCTGCTTCTAGTGCCAGTGGAGCTGCCTTTTGCCGTTCCGCTGCTTTAATTCTAATGGCCCTTCTACTCTTGCGGCATGCACTTTCTGTCACAGATgctgatggtgatgatgatccGTCAACCTTTTTTTCCATCTTCTTACTTCGAGCAGCTGGATTTCTCTTACCTTGCTATATTATGGCTTGGGCAATCAGCATCTTGCAACGTCGGCGACAAAGACAGCAGGAAGCTGCAGCTCTGGCTGCAACTCAAGTTGCTTTTGTACTGCAATCTGGACAGCGTCAGGGTCTGCAATTCGCGATAGCACCGGGACCCACAGTGAATGCACACCCGGAACATATTGTTTAG | 885 | 0.5085 | MSDHLVLYVDRLVRPVPVESVTEPAQLVPDLSQAGKSVDVPGPSGSAPPADDDARSEHDEGGGEDEPLVPSAECRICQEEDTINNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHKPYQPGYIAPPPRPHAEETTIDIGGGWTISGAPLDLRDPRLLAIAEAERQFLEAEYDEYAASSASGAAFCRSAALILMALLLLRHALSVTDADGDDDPSTFFSIFLLRAAGFLLPCYIMAWAISILQRRRQRQQEAAALAATQVAFVLQSGQRQGLQFAIAPGPTVNAHPEHIV | 294 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto6g3024 | 294 | CDD | RING_CH-C4HC3_MARCH | 74 | 120 | - | - | |
Sto6g3024 | 294 | Coils | Coil | 162 | 182 | - | - | |
Sto6g3024 | 294 | SUPERFAMILY | RING/U-box | 72 | 124 | - | - | |
Sto6g3024 | 294 | SMART | ringv_2 | 73 | 120 | IPR011016 | GO:0008270 | |
Sto6g3024 | 294 | MobiDBLite | consensus disorder prediction | 51 | 65 | - | - | |
Sto6g3024 | 294 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 65 | 128 | IPR013083 | - | |
Sto6g3024 | 294 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED | 1 | 280 | - | - | |
Sto6g3024 | 294 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 66 | 126 | IPR011016 | GO:0008270 | |
Sto6g3024 | 294 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 1 | 280 | IPR033275 | - | |
Sto6g3024 | 294 | Pfam | RING-variant domain | 74 | 119 | IPR011016 | GO:0008270 | |
Sto6g3024 | 294 | MobiDBLite | consensus disorder prediction | 24 | 70 | - | - | |
Sto6g3024 | 294 | Pfam | Protein of unknown function (DUF3675) | 125 | 243 | IPR022143 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto6g3024 | Sto-Chr6 | 37302218 | 37305134 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto6g3024 | 70 | 149 | C3H Transcription Factor Family | AT2G37950 | 32.609 | 1.43e-07 | 49.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto6g3024 | - | - | ahf:112734090 | 403.29 |