Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3022 ATGGACTCAATGCCTTATCAGGTTGTGGCTCAGTTGACAACGCAGGCTGAGTATGTGGAAAGAACTCCCGAGTTCGATCTCCACACGGACTCCGGATACCTGTGGTGCCCATCAAAGTCTAGAGATGCAAAAACTCATTTGACCACTTGTGTTGGGATACTCTCAATGCCCTTTGCACTTTCTCAAGGGGGATGGGTGAGTTTGGTTCTGCTACTTTCCATAGCACTTGTGTGTTGCTACACCGGGCTGCTTCTTCAGAGATGTATGGATGCACGTCCCCTCATCAAATCCTACCCTGACATAGGAGAGGAGGCTTTTGGGTTCAAAGGGAGGGCCATAGTGGCCATTTTCATGTACTTAGAGCTGTATTTGGTGGCCACGGAGTTTCTGATACTTGAAGGTGATAATCTGCACAAGTTGTTCCCAAAAATGAGTTTTGAAGTGTGTGGGATTAGGATTGCAGGCAAACAGGGCTTTGTCCTAATGACTTCCCTAGTGATATTGCCTACCACGTGGCTCACAAGTTTAGGGGTTCTGGCCTATGTTTCTGTGGGTGGGGTAGTGGCTTCTGTTATAGTGGTTGGGTGTGTTGTGTGGGTGGGTGGTTTTGATGGTGTGGGGTTCCATGAAAGAGGGAAGATTGTGAATTGGGGAGGATTGACTACTTCTGTCAGCCTCTTTGCTTTCTGCTATTGTGGTCATGCTGTGTTTCCCACACTCCGCAATTCCATGAAAAATACAGGCCAATTTTCTAAGGTTCTGCTTGTATGCTTCATCACCAGCACTATAACCTATGGATCCATGGCCATCATAGTTATAATCACTCCAATTGCCACAGCCATTGAAGACAAAGTGCTTTTCCACAAGAGAAGCAGGCCTTTTGGCATCCTCATCACTAGAACAGCCATTTTGTTAAGCACTGTTCTTGTGGCCCTATTCATTCCCTTTTTTGGATATCTTATGGCTTTCATTGGTTCTTTCTTGAGTATCTCTTGCTCATTGTTGCTACCTTGCTTGTGCTACCTTAAGATCAATAAATCTGCTAGGAGATTTGGGCTGGAGTTTATGCTCATTATAGGGATTCTCCTCATAGGATCATTCATTGCTGTATTGGGAACTTATAGCTCTGTGAGACAGATAGTGAATCATCTTCAGCAGAAGCCATGA 1167 0.4524 MDSMPYQVVAQLTTQAEYVERTPEFDLHTDSGYLWCPSKSRDAKTHLTTCVGILSMPFALSQGGWVSLVLLLSIALVCCYTGLLLQRCMDARPLIKSYPDIGEEAFGFKGRAIVAIFMYLELYLVATEFLILEGDNLHKLFPKMSFEVCGIRIAGKQGFVLMTSLVILPTTWLTSLGVLAYVSVGGVVASVIVVGCVVWVGGFDGVGFHERGKIVNWGGLTTSVSLFAFCYCGHAVFPTLRNSMKNTGQFSKVLLVCFITSTITYGSMAIIVIITPIATAIEDKVLFHKRSRPFGILITRTAILLSTVLVALFIPFFGYLMAFIGSFLSISCSLLLPCLCYLKINKSARRFGLEFMLIIGILLIGSFIAVLGTYSSVRQIVNHLQQKP 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3022 388 Pfam Transmembrane amino acid transporter protein 294 375 IPR013057 -
Sto6g3022 388 Pfam Transmembrane amino acid transporter protein 51 271 IPR013057 -
Sto6g3022 388 PANTHER OS05G0424000 PROTEIN-RELATED 272 382 - -
Sto6g3022 388 PANTHER OS05G0424000 PROTEIN-RELATED 47 271 - -
Sto6g3022 388 PANTHER OS06G0228500 PROTEIN 272 382 - -
Sto6g3022 388 PANTHER OS06G0228500 PROTEIN 47 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3022 Sto-Chr6 37283640 37286130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3022 51 381 Amino Acid or Auxin Permease AAAP Family AT3G28960 43.935 1.61e-109 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3022 K15015 - twl:120001591 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3022 6 37283640 37286130 Sto6g3022 6 37283640 37286130 ECH