Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3014 ATGCAAAACCAAACCATGCATTTGGTTCTGTCCTCTGATGCTAAGCCAAGGCTGAAATGGACACCTGAGCTTCACCAACGGTTTATTGAGGCTGTGAATCAGCTTGGAGGAGCAGAAaAGGCAACCCCAAAGAGTCTTATGAGGGTGATGGGGATTCCAGGACTTACCTTGTACCACTTGAAGAGCCATTTACAGGCATtttcactttttAAATTCAGACTTGGGAAAAGTCCACAACTAGATTCCTTCTCTGATGATAAACAAGATTATAGAGAAACCAATAGCAGTGATGGTGGTCATTGCAGCACAGAAATCAGTGTGGGGACACAGAATCAGATGGCTGAAAGCCAGCAGATTGCTCAAGCTCTCCAAATGCAAATGGAAGTGCAGAGGAAGCTTTATGAACAAATAGAAGTGCAGAGGCATTTACAGTTTCGGATTGAAGCTCAAGGGAAGTACTTACAATCAGTTCTAATGAAAGCTCAAGAAGCACTTTCTGGGTACAATTCTTCTGCTTCAGGTATAGAGCATGCAAAAGCTGAGCTCTCTCAGTTAGTCTCAATAATCAACAATGGCTGCCCAAGCTCCCCCATCTCAGAACTGACAGAAACAAGAGTGTTGAGTTTGAAAGATGGAGAGAGGAAGAAGCAAGACAGAGGGACTATGTGTTCATTGGAGAGCTCATTGTCATCTTCTGAAACTTCAGTGGAACTGCAACTGATGACTGCTCacccagaagaagaagaagatgatgatgataaggcATTGAATGGTGACACAAAGAATCAAGCCTGTGGGAGCAAGAGGAATAATAGAGCCACTTACTCTGATGGTTACTGTGTTGAGCAACCAATCAGTAAGAGATGTGGAAACAACAAGTTGAGGAAATCAGAGTTGTCTGAAATGCTAGACTTGAATAGCCAATATCAGAGTGACATTGACTCTACCTCAAAGACAACAACAATAGACTTGAATTGCAGTACAATGAACAGTTCTAGCTTTTTGGAATCTTGA 1014 0.4073 MQNQTMHLVLSSDAKPRLKWTPELHQRFIEAVNQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQAFSLFKFRLGKSPQLDSFSDDKQDYRETNSSDGGHCSTEISVGTQNQMAESQQIAQALQMQMEVQRKLYEQIEVQRHLQFRIEAQGKYLQSVLMKAQEALSGYNSSASGIEHAKAELSQLVSIINNGCPSSPISELTETRVLSLKDGERKKQDRGTMCSLESSLSSSETSVELQLMTAHPEEEEDDDDKALNGDTKNQACGSKRNNRATYSDGYCVEQPISKRCGNNKLRKSELSEMLDLNSQYQSDIDSTSKTTTIDLNCSTMNSSSFLES 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3014 337 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 15 69 IPR006447 GO:0003677
Sto6g3014 337 MobiDBLite consensus disorder prediction 212 268 - -
Sto6g3014 337 Gene3D - 14 76 - -
Sto6g3014 337 SUPERFAMILY Homeodomain-like 14 69 IPR009057 -
Sto6g3014 337 Coils Coil 120 140 - -
Sto6g3014 337 Pfam MYB-CC type transfactor, LHEQLE motif 118 163 IPR025756 -
Sto6g3014 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 235 IPR044848 GO:0003700
Sto6g3014 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 235 327 IPR044848 GO:0003700
Sto6g3014 337 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 235 - -
Sto6g3014 337 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 235 327 - -
Sto6g3014 337 Pfam Myb-like DNA-binding domain 17 65 IPR001005 -
Sto6g3014 337 MobiDBLite consensus disorder prediction 222 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3014 Sto-Chr6 37244708 37246179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3014 6 288 G2-like Transcription Factor Family AT1G69580 49.338 4.87e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto6g3014 Myb_DNA-binding 2.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3014 - - gmx:100787178 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3014 6 37244708 37246179 Sto6g3014 6 37244708 37246179 ECH