Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g3003 ATGGAGGCCAcaacaccaccaccaccaagatCTGACCTCCCTCCTGGCTTTAGGTTTCACCCAACTGATGAAGAACTAATCGTCTATTACCTCTGTAACCAAGCCACATCCAAGCCATGCCCTGCTTCCATCATCCCTGAAGTGGATATCTATAAATTTGATCCATGGGAGTTAcctgAGAAAGCAGAGTTTGGAGAGAATGAATGGTATTTCTTTAGCCCACGAGACAGGAAGTACCCAAATGGGGTTAGGCCAAACAGAGCCACTGTATCTGGCTACTGGAAGGCCACTGGCACAGATAAGGCTATCTACAGTGGGGCCAAGCATATTGGGGTGAAGAAAGCTTTGGTCTTCTACAAAGGAAGGCCCCCAAAGGGTATCAAAACTGATTGGATTATGCATGAGTATCGCCTTATTGGATCAAAAAGACAAGCCCCCAAGCAAATGGGATCCATGAGACTGGATGACTGGGTGCTGTGTAGGATCTACAAGAAGAAGAGCATAGCAAAAGCAATGGAGcaaaaggaggaagaagaggaagaggaataCCCAACTTCTTCCCAAATGAAcagtagtaataataataatgaagagcAAATGATGAATATGATGATGAAGCTTCCAAGGCCTTGTTCTCTTACACATCTTCTGGACATGGACAATTACTTGCCTCCACTCTCACACCTCTTATCAGAAACATCCTATAACACAACCTTTGACTACCAAATTACCTCAGCTTAtactaataatagtaataatgctGGAAATGTGGTAATAGACCCATTTGTGAAAACTCAGGCCTATGAAACTCCTAGCCATTATTATGCACCATCATCAACTAGCCAATGGTTGTGA 855 0.3906 MEATTPPPPRSDLPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPEKAEFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIYSGAKHIGVKKALVFYKGRPPKGIKTDWIMHEYRLIGSKRQAPKQMGSMRLDDWVLCRIYKKKSIAKAMEQKEEEEEEEYPTSSQMNSSNNNNEEQMMNMMMKLPRPCSLTHLLDMDNYLPPLSHLLSETSYNTTFDYQITSAYTNNSNNAGNVVIDPFVKTQAYETPSHYYAPSSTSQWL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g3003 284 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 12 257 - -
Sto6g3003 284 Pfam No apical meristem (NAM) protein 14 138 IPR003441 GO:0003677|GO:0006355
Sto6g3003 284 ProSiteProfiles NAC domain profile. 13 165 IPR003441 GO:0003677|GO:0006355
Sto6g3003 284 SUPERFAMILY NAC domain 8 165 IPR036093 GO:0003677|GO:0006355
Sto6g3003 284 PANTHER NAC TRANSCRIPTION FACTOR 56 12 257 - -
Sto6g3003 284 MobiDBLite consensus disorder prediction 173 195 - -
Sto6g3003 284 Gene3D NAC domain 22 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g3003 Sto-Chr6 37159791 37161222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g3003 1 229 NAC Transcription Factor Family AT1G69490 69.099 4.87e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto6g3003 NAM 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g3003 - - adu:107489303 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3003 6 37159791 37161222 Sto6g3003 6 37159791 37161222 ECH