Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2995 ATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTATCTTAAGGAAAAAGGCGCACTCAGTCCTGCAACAGCTATCAACTTTGCCTTGGATATGGCCAGAGGGATGGCCTATCTTCACAATGAACCAAATGTCATAATTCATCGAGACCTAAAGCCAAGGAATGTACTTCTAGTCAATTCTAGTGCAGACCATTTAAAAGTCGGGGATTTTGGACTGAGTAAGCTTATCAAGGTCCAGAATTCTCATGACGTTTACAAGATGACTGGTGAAACTGGAAGTTACCGCTATATGGCTCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGACGTTTTCTCCTTTGCAATGATTCTGTATGagATGCTTGAGGGGGAACCTCCTTTTGCAAGTTATGAACCTTATGATGGAGCAAAATATGTGGCTGATGGACACAGGCCAACTATTCGTGCAAAGGGTTATCTCCCTGAACTGCGGGAGTTAACCGTGCAGTGTTGGGATGCTGATATGAATCAAAGACCATCTTTCTTGGAGATCCTTAAACGGcttgaaaagatgaaggaaaattTACCTGCAGATCATCACTGGCACCTGTTCTCTTCATAG 618 0.4126 MLITEYLRGGDLHQYLKEKGALSPATAINFALDMARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFASYEPYDGAKYVADGHRPTIRAKGYLPELRELTVQCWDADMNQRPSFLEILKRLEKMKENLPADHHWHLFSS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2995 205 SMART serkin_6 2 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2995 205 PRINTS Tyrosine kinase catalytic domain signature 4 17 IPR001245 GO:0004672|GO:0006468
Sto6g2995 205 PRINTS Tyrosine kinase catalytic domain signature 42 60 IPR001245 GO:0004672|GO:0006468
Sto6g2995 205 PRINTS Tyrosine kinase catalytic domain signature 158 180 IPR001245 GO:0004672|GO:0006468
Sto6g2995 205 SUPERFAMILY Protein kinase-like (PK-like) 1 200 IPR011009 -
Sto6g2995 205 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2995 205 Gene3D Transferase(Phosphotransferase) domain 1 1 195 - -
Sto6g2995 205 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 1 197 - -
Sto6g2995 205 Pfam Protein tyrosine and serine/threonine kinase 1 187 IPR001245 GO:0004672|GO:0006468
Sto6g2995 205 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 197 - -
Sto6g2995 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2995 Sto-Chr6 37076392 37079392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2995 1 205 MAP Kinase Kinase Kinase AT1G14000 87.805 4.78e-137 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Sto6g2995 PK_Tyr_Ser-Thr 3.4e-45 CL0016