Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2948 ATGAGTAGTTGTGTGAAGCCACTGATGCAGAACGAGGAAAATCCAGTAGTTCTTCTACATGGTTTTGACAGCTCATGTTTGGAATGGAGATATACATATCCATTGCTTGAGGAAGCTGGTTTGGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAGAAACTTCCACCATGTGATGTGGTATCAAAACGTGATCACTTCTATCAGTTTTGGAAGTCCTACATCAGAAGGCCAATGTTATTAGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCAGTCAATTATCCAGAAGCTGTGGAAAAGCTTGTTTTGATTGATGCTAGTGTATATGCAGAGGGAACAGGAAATCTAGCAACCTTACCTAGAGCTGTAGCCTATGCTGGGGTATATTTGTTGAAGAGCATCCCGTTACGCTTATATGCAAACTATTTGACCTTCACTAATATGTCATTCAGTACCAGCCTTGATTGGACTAATGTAGGCCGCTTGCATTGTTTATTGCCCTGGTGGGAGGATGCTGCGGTGGATTTTATGACTAGTGGTGGTTATAATGTTTCTTCCGAGATAAAAAAGGTAAAGCAGAAAACACTCATCATTTGGGGTGAGAATGACCGCATCATCAGCAATAAGCTTGCTGTGAGACTGCACTGTGAGTTACCCGATGCAATTTTACGCCAAATACCTGATTGTGGCCATCTTCCTCATGTTGAAAAGCCAGATTCTGTTGCCAAATTAATTGTCGATTTTGTTCAGAGAGAGTCCAACAAGGTAAATAAATTAGTCTCACATATGTGA 816 0.4191 MSSCVKPLMQNEENPVVLLHGFDSSCLEWRYTYPLLEEAGLETWAIDILGWGFSDLEKLPPCDVVSKRDHFYQFWKSYIRRPMLLVGPSLGSAVAIDFAVNYPEAVEKLVLIDASVYAEGTGNLATLPRAVAYAGVYLLKSIPLRLYANYLTFTNMSFSTSLDWTNVGRLHCLLPWWEDAAVDFMTSGGYNVSSEIKKVKQKTLIIWGENDRIISNKLAVRLHCELPDAILRQIPDCGHLPHVEKPDSVAKLIVDFVQRESNKVNKLVSHM 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2948 271 PANTHER HYDROLASE 1 270 - -
Sto6g2948 271 PRINTS Alpha/beta hydrolase fold signature 40 55 IPR000073 -
Sto6g2948 271 PRINTS Alpha/beta hydrolase fold signature 85 98 IPR000073 -
Sto6g2948 271 PRINTS Alpha/beta hydrolase fold signature 99 112 IPR000073 -
Sto6g2948 271 PRINTS Alpha/beta hydrolase fold signature 203 217 IPR000073 -
Sto6g2948 271 SUPERFAMILY alpha/beta-Hydrolases 13 258 IPR029058 -
Sto6g2948 271 PRINTS Epoxide hydrolase signature 20 38 IPR000639 GO:0003824
Sto6g2948 271 PRINTS Epoxide hydrolase signature 40 55 IPR000639 GO:0003824
Sto6g2948 271 PRINTS Epoxide hydrolase signature 99 112 IPR000639 GO:0003824
Sto6g2948 271 PRINTS Epoxide hydrolase signature 234 256 IPR000639 GO:0003824
Sto6g2948 271 PANTHER ALPHA/BETA FOLD HYDROLASE 1 270 - -
Sto6g2948 271 Gene3D alpha/beta hydrolase 8 268 IPR029058 -
Sto6g2948 271 Pfam Alpha/beta hydrolase family 16 251 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2948 Sto-Chr6 36682826 36686455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2948 9 259 Miscellaneous Gene Families AT1G52750 25.267 4.50e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2948 - - mtr:MTR_4g083080 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2948 6 36682826 36686455 Sto6g2948 6 36682826 36686455 ECH