Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2942 atgggtgaGGCTAACGAAGGGAGAAGAAGAAGCTCCAAAGCTATGGAGAATTTGTCTCTTCAAATGGAAAAGTATCCTAAGGATCTGCTTCAGAGGTTCATGTgctgtagtGCAAAGCAATCGCAATATACGGAGGCTCGTGAGGAAGAATCGGAGGAGATTGAGCTCAACCTTGGGCTTTCCTTGGGCGGTCGATTCGGCGTTGACAAGAGCGTTAAGTCGACGAAGCTTATGCGATCCTCCTCTGTCGTCGGGACAATGCCTCTCGTAAGAGAGGACGTCCGCTCCTCCACCACTCCGCCGGCGCCGGCGCCGTACCCGACGACGGCGATGACGACTCTAATGAGGACTTCGTCGCTGCCGACGGAGACCGAGGAGCagtggaggaagaggaaggagtTGCAGACGTTGAGGCGGTTGGAGGCCAAGAGACGGCGCTCGGAGAAGCAGAGGAGTTCCAAGTCCGCGGAGAGAGAGTCCTCCGCCGCCGCCGGCGcggaggaggagaggcgtgaaaCTGTAAATTCAACGGCGTCGCCACCGCCTTCTTTTGGATTGCCTAGTTGGCCTGCATCAATAGGTACTAATACTACTACTACAAGGCAAGTGGTTCTTGGTGATATGTTAGCCAAAGGGAATAAGGTTGGGTTTCAAGGAAATCCTTTTGGACAGCCTTCTTCTCAAGGCTCCACAGATTCTCAAGGTGGAGGAAGCTCGTCCGGAATGTCAGAGTTGGAGAGCAAGCCTTTTCAAGGAACAAGCAGTTTTGGCGAAACAAGAAGCCCGGCTAGTAATCATCTGTCGCAGCAGGATCGAAGCAATCAGGACTCTAAAGGTTCATCAGGTACAACAAAACCAACTGAGAATGTTGTGATCAGAACTTCCAGAGCCGAGGCGCCAGAGAATCCGCCCAAGAAATCTGACACTGCTGGCCAGAATCGGAGAAGGGAAATCGGGACGAATTCAGTGGAGGACATGCCTTGTGTTTTTGCGAAAGGGGACGGGCCGAACGGGAGGAGAATCGATGGAATCTTATATAGGTATGGAAAAGGTGAGGAAGTGAGGATAATGTGTGTGTGCCATGGAAATTTCTTGTCCCCAGCAGAGTTTGTAAAGCatgctggtggtggtgatgtTGCTCACCCACTTAGGCACATAGTTGTTAACCCTTCTCCTACTCCCTTTTTGTAA 1191 0.4836 MGEANEGRRRSSKAMENLSLQMEKYPKDLLQRFMCCSAKQSQYTEAREEESEEIELNLGLSLGGRFGVDKSVKSTKLMRSSSVVGTMPLVREDVRSSTTPPAPAPYPTTAMTTLMRTSSLPTETEEQWRKRKELQTLRRLEAKRRRSEKQRSSKSAERESSAAAGAEEERRETVNSTASPPPSFGLPSWPASIGTNTTTTRQVVLGDMLAKGNKVGFQGNPFGQPSSQGSTDSQGGGSSSGMSELESKPFQGTSSFGETRSPASNHLSQQDRSNQDSKGSSGTTKPTENVVIRTSRAEAPENPPKKSDTAGQNRRREIGTNSVEDMPCVFAKGDGPNGRRIDGILYRYGKGEEVRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSPTPFL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2942 396 Coils Coil 130 159 - -
Sto6g2942 396 MobiDBLite consensus disorder prediction 299 321 - -
Sto6g2942 396 MobiDBLite consensus disorder prediction 123 174 - -
Sto6g2942 396 MobiDBLite consensus disorder prediction 93 198 - -
Sto6g2942 396 PANTHER AFP HOMOLOG 2 22 393 IPR031307 GO:0007165
Sto6g2942 396 Pfam Ethylene-responsive binding factor-associated repression 49 85 IPR012463 -
Sto6g2942 396 MobiDBLite consensus disorder prediction 215 322 - -
Sto6g2942 396 MobiDBLite consensus disorder prediction 219 291 - -
Sto6g2942 396 Pfam Tify domain binding domain 354 388 IPR032308 -
Sto6g2942 396 Pfam Putative nuclear localisation signal 114 247 IPR032310 -
Sto6g2942 396 PANTHER NINJA-FAMILY PROTEIN AFP1 22 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2942 Sto-Chr6 36628768 36633385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2942 - - zju:107429065 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2942 6 36628768 36633385 Sto6g2942 6 36628768 36633385 ECH