Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2939 ATGTGCGGAATTGCTCTCATTGTCTCAGGCGTTCGAATTGACACTTCATCTTTGTTTTTGGATTCAACATGCCCACCTTGCGAAACTGAAAAATTGGTGTTCTCCGTAGATGATCTCAAAGCAGCTCTGCGAAAAAGGGGTCCGGATAGCATAGGTAGCAAGAAagtttctcttcaatttaatgTCTTGGGTCAAGAACAAATTTTTAATGAGCTGGAGCACAATTTTGGCGTCCAAAATCTTGCTACTGCTGAACTGCATTTACTTGGTGCAACATTACAACTCAGGGGAATAAACCCACTTGTTCAACCTTTGGTGGATGCTTCTGGAAATATTCTTGTATACAATGGTGAAATTTTTGGAGGAATCAAGATTGCAAGCGATTGCAATGATGCTGAATTTCTTATGCAAACACTGGGAAAGTGCTGCTCGTGTGATTCTAATTTACACTGCCATCTTAACAGTGGGGAAAATTCTATTCCAGACCTTCTTTCTATGATTAAAGGACCATGGGCTATAATCTATTGGCAGGATAATTCAAGAACCCTTTGGTTTGGTCGAGATGCATTTGGCAGGCGAAGCCTCCTTGTTCACTGGCCTACTGAAGAAGACTCAAGATTTCTGCTTTCTTCTGTGTCACCTGTTTCACCAACTGATCAGGCTTCTGGTTGTCCCAGTTACTGGGAAGAGCTACCATGTGGAATATACAGTGTTTGTGTGGATGCATCAAGTTCTAATGGATGTCTATTCGGTGAAGTTAGAAGACATGAATATACAAGCTCAATGCTGAAGGAACTTATCAAATGGGAGAGAACATCTATTGAACCCAAATATGAAGAGCTTCCATCATCCCAAGATGTGAATTCAACTCCATTGGAGACAGTTCCATGTGAAACAGGCCCAATTCAATTCTCAACTCCAATGCTAGCTCATACTGTGCTGAATGCTTTAAAGGAATCTGTGTTACGGCGCACTTCATTGTATACCATATATCAGGCAGTGATCCCACAAGAGAATTTTGTTCCTATGGCAGTTCTTTTTTCTGGAGGCCTGGATTCCATGATACTTGCAGCACTATTGGATCAGTGCCTGGATCACTGTTATGAAATTGATCTACTTAATGTGAGCTTTGATGGTCAGTCTGCTCCTGATAGAATATCTGCCAAGGCAGGATTAAAAGAACTAAGAAGAGTTTCACCTTCCAGAAGGTGGAGACTTGTGGAAATTGATGCTGATTTGTCAGACTTGGCTTTTGAAACCAGTCATGTTATGTCACTCATAGAACCTGCCAATACGTACATGGATTTGAATATAGGAATCGCATTATGGCTGGCTGCTCGTGGTGATGGATGGGTGTTTGATGGGaatagtgatgatgatgatagcaATCATGCACGTATTAAGTACAAGTCCAAGGCAAGGATTGTACTTGTTGGTTCTGGTGCTGATGAACAGTGCGCTGGCTATGGTAGACATAGAACAAGTTATAGACGAGGAAGTTGGTTGGGGCTAAATGAGGAAATGAAACTGGATATGCAGAGAATTTGGAAAAGAAATTTAGGGAGGGATGATAGGTTAATTGCTGACAATGGAAAAGAGGCTAGATTTCCATTTTTGGATGAGGATGTTATAAGGATTTTGCTCGACATTCCGTTGTGGGAAGTCGCCAACCTTGATCAACCCAGTGGCATTGGTGATAAAAAGATTCTAAGAGAGGTTGCAAAATTGCTTGGTTTATATGAAGCAGCAGTGTTGCCGAAACGAGCTATCCAGTTTGGTTCCAGAATTGCGAGGGAGTCGAATCGGAAGAATTTCGGAAGTAATCGAGCAGCAAATCAGGCATCTGCAGGCAGTGTAACAATTCACAAGAAATCCAACATGAGTTGA 1887 0.4102 MCGIALIVSGVRIDTSSLFLDSTCPPCETEKLVFSVDDLKAALRKRGPDSIGSKKVSLQFNVLGQEQIFNELEHNFGVQNLATAELHLLGATLQLRGINPLVQPLVDASGNILVYNGEIFGGIKIASDCNDAEFLMQTLGKCCSCDSNLHCHLNSGENSIPDLLSMIKGPWAIIYWQDNSRTLWFGRDAFGRRSLLVHWPTEEDSRFLLSSVSPVSPTDQASGCPSYWEELPCGIYSVCVDASSSNGCLFGEVRRHEYTSSMLKELIKWERTSIEPKYEELPSSQDVNSTPLETVPCETGPIQFSTPMLAHTVLNALKESVLRRTSLYTIYQAVIPQENFVPMAVLFSGGLDSMILAALLDQCLDHCYEIDLLNVSFDGQSAPDRISAKAGLKELRRVSPSRRWRLVEIDADLSDLAFETSHVMSLIEPANTYMDLNIGIALWLAARGDGWVFDGNSDDDDSNHARIKYKSKARIVLVGSGADEQCAGYGRHRTSYRRGSWLGLNEEMKLDMQRIWKRNLGRDDRLIADNGKEARFPFLDEDVIRILLDIPLWEVANLDQPSGIGDKKILREVAKLLGLYEAAVLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVTIHKKSNMS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2939 628 Pfam Asparagine synthase 501 592 IPR001962 GO:0004066|GO:0006529
Sto6g2939 628 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 28 222 IPR029055 -
Sto6g2939 628 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 613 - -
Sto6g2939 628 CDD Asn_Synthase_B_C 316 593 IPR001962 GO:0004066|GO:0006529
Sto6g2939 628 CDD Gn_AT_II_novel 1 236 - -
Sto6g2939 628 Pfam Glutamine amidotransferase domain 103 211 IPR017932 -
Sto6g2939 628 Gene3D HUPs 305 626 IPR014729 -
Sto6g2939 628 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 337 613 - -
Sto6g2939 628 MobiDBLite consensus disorder prediction 603 628 - -
Sto6g2939 628 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 38 211 IPR029055 -
Sto6g2939 628 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 241 IPR017932 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2939 - - gmx:100801355 934.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2939 6 36598255 36605002 Sto6g2939 6 36598255 36605002 ECH