Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2922 ATGAATGTGCAGGAAGAGAAAGTCACCACCATGGACTTGCAGCCTCAACCCTCTGAACACTTCTGCTATGTCCGTTGCAACTTCTGCAATACTGTGCTTGCGGTTGGGATTCCATGCAAGAGGCTTCTGGACACAGTGACAGTGAAGTGTGGTCACTGTAGTAACCTCTCCTTTCTCAGCACAAGACCTCCTCCTACTACTacttctcatcatcatcatcacaacaacaacaacaatcaaaaccccAATAATAATATCGATCACACCCTCACCCTTCAGGGGTTTTACGGTGATTTGAAAAAAGGAGGAggatcatcttcttcatcaccaTCATCCTCATTCAGTACTACTACTTCATCATCTACCGATCCAGTGTCTCCAAAAGCACCACCTTTTGTTGTTAAACcACCTGAGAAGAAACACCGACTTCCTTCGGCTTATAATCGTTTCATGAAAGAGGAGATACAGCGTATCAAAGCAGCCAACCCTGAGATTCCTCATCGTGAAGCTTTCAGTGCTGCAgccaaaaatAATCTCGCAAGAGAGACCGAACGAGCCGATTCCGCAGCAACAGCTTATCGGTGCGGCAgtcatgaaaaagaaaagaggaaagatgATGGAGGAGCAGAGTATATGCAACTGAACCACGAATTGCAGCCCTTTCAAGGGCATCAGAAACCCATGAATTGA 690 0.3986 MNVQEEKVTTMDLQPQPSEHFCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPTTTSHHHHHNNNNNQNPNNNIDHTLTLQGFYGDLKKGGGSSSSSPSSSFSTTTSSSTDPVSPKAPPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNNLARETERADSAATAYRCGSHEKEKRKDDGGAEYMQLNHELQPFQGHQKPMN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2922 229 Pfam YABBY protein 17 177 IPR006780 GO:0007275
Sto6g2922 229 PANTHER PROTEIN YABBY 6-RELATED 9 187 IPR006780 GO:0007275
Sto6g2922 229 MobiDBLite consensus disorder prediction 63 141 - -
Sto6g2922 229 SUPERFAMILY HMG-box 124 175 IPR036910 -
Sto6g2922 229 MobiDBLite consensus disorder prediction 178 229 - -
Sto6g2922 229 MobiDBLite consensus disorder prediction 63 91 - -
Sto6g2922 229 PANTHER PROTEIN CRABS CLAW 9 187 - -
Sto6g2922 229 MobiDBLite consensus disorder prediction 194 211 - -
Sto6g2922 229 MobiDBLite consensus disorder prediction 102 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2922 Sto-Chr6 36472554 36477812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2922 1 177 C2C2-YABBY Transcription Factor Family AT1G69180 55.618 2.59e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Sto6g2922 YABBY 9.2e-54 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2922 K25796 - gmx:100819079 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2922 6 36472554 36477812 Sto6g2922 6 36472554 36477812 ECH