Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2885 ATGATTCCCAGTGAGATCAGAGGAATCCACTACCTCTCCCCCGACACTCCATTCTTACTCGACTCCTCTGCCTTCTACGACCTCCCAAACAATCTCCTCCAAATCAACGCCGCCGCCGGTATTCTCTCCACCGCCTCGACCTCCGACGACGGCGGCGCCGCCGCCGTGGACGAGCGGAAGCGGAGGCGGATGATCTCGAACAGAGAATCGGCTCGGAGATCGAGGATGAGGAAGCAGAGGCATCTGGACGAGCTGTGGTCGCAGGTTCTGAGGCTGAGATCGCAGAATCACAACCTGATCGACAAGCTGAACCGTCTGTGCGAGTCGCACGATAGGGTTGTTCAGGAGAACGCGAAGCTCAGAGACGAGGCCTCCGATCTCCGCCAATTGATCGCCGATTTGCAGCAGATCCGATCATTCGCCGATTTTGACGACGGATTGCTTTGTCATGGTCATGATCCCTCTCCCTACCAGCCCCTCGACGAGCCTCTCCACCACCGCCTTCCCCAACCCGATCCCCTGGAACGACGGGTCCACCACCACGTCCCATATGATGGCGTTGAACACGCCGTCGCCCGTCGCCCTCGCGAACGCCACCGGCTTCTTCGTCTTCTTGTGCTCCACCCACAGCAACGTGTCCGTGTTCTCCAGCGCCCGCCGGATCTTCTCCGGATCGCGCCTCGGAAACCCTACCGCCACGAAGACGGAATTCAGCTGGTCCAGGTTCAGATCCTCGGTCGTGCGGCGGAGGACGAAGCCGCGGGACTCCAGGGCTTCGTCGGAGACGGATAA 792 0.6048 MIPSEIRGIHYLSPDTPFLLDSSAFYDLPNNLLQINAAAGILSTASTSDDGGAAAVDERKRRRMISNRESARRSRMRKQRHLDELWSQVLRLRSQNHNLIDKLNRLCESHDRVVQENAKLRDEASDLRQLIADLQQIRSFADFDDGLLCHGHDPSPYQPLDEPLHHRLPQPDPLERRVHHHVPYDGVEHAVARRPRERHRLLRLLVLHPQQRVRVLQRPPDLLRIAPRKPYRHEDGIQLVQVQILGRAAEDEAAGLQGFVGDG 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2885 263 Gene3D - 57 111 - -
Sto6g2885 263 Coils Coil 103 137 - -
Sto6g2885 263 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Sto6g2885 263 SUPERFAMILY Leucine zipper domain 59 109 IPR046347 GO:0003700|GO:0006355
Sto6g2885 263 CDD bZIP_plant_GBF1 60 111 IPR045314 GO:0003700|GO:0006355
Sto6g2885 263 Pfam bZIP transcription factor 59 108 IPR004827 GO:0003700|GO:0006355
Sto6g2885 263 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
Sto6g2885 263 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 120 IPR004827 GO:0003700|GO:0006355
Sto6g2885 263 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 41 140 IPR044521 -
Sto6g2885 263 PANTHER BZIP PROTEIN (ATBZIP48) 41 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2885 Sto-Chr6 36050899 36061339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2885 2 148 bZIP Transcription Factor Family AT1G13600 49.711 2.44e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto6g2885 bZIP_1 2.2e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2885 - - gmx:100778078 166.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2885 6 36050899 36061339 Sto6g2885 6 36050899 36061339 ECH