Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2882 ATGGCTCAAGATACTACCAGTGATGATTTAAATAGTAAGCGTCACGGTCTCTTGAAAGATCAAGTTCGTTTGGTTAAAAGAAAAGACTCTGATCGCTATGAGATTGCCCCTATCCATGATCTGCTATCATTTGAAAAGGGTTTCTTTATAGTAATCCGTGCTTGTCAAGTATTGGCCCAAAAGAACGATGGAATAATATTGGTAGGATTGGCGGGTCCTTCAGGTGCTGGGAAGACTGTATTTACTGAAAAAATACTCAACTTCTTGCCCGGCATTGAAGTCATTTCCATGGACAATTACAATGATTCCAGTCGAATTGTTGATGGAAACTTTGATGACCCACGCTTGACAGACTATGACACATTGCTCCAGAATGTCCATGATTTGAAGGCAGGAAAACCAGTTGAGGTcccaatatatgattttaagtCCAGTTCACGTACAGGATACAGAACAGTTGAAGTCCCTAGCTCCCGCATTGTTATTATAGAGGGAATCTATGCTTTGAGTGAGAGGTTGCGACCCCTATTGGACCTTCGAATATCTGTCACAGGTGGAGTTCACTTGGACCTTGTTAAACGAGTTATTCGTGACATACAACGTGCTAGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATACCCAATGTACAAGGCCTTTATTGAGCCAGATCTCCAGACAGCGCATATCAAAATTGTCAATAAGTTCAATCCATTTACTGGATTTCAGAATCCCACTTACATATTAAAGTCAGCGAGGAATGTAACTGTTGATGAAGTTAAAGCTGTCTTCACTGAAGATCATAAGGAAACAACAGAGCAGACTTTTGACATATATCTTCTACCTCCTGGTGAAGACCCAGAAACTTGCCAATCATATTTACGGATGCGGAACAAGGAAGGGAAATACAGTCTTATGTTTGAGGAATGGGTGACAGATAATCCATTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTGATGGCCCTGGGGTACACAATAGCTGCCATCCTTAAAAGAAACAGCCACGTATTCTGTGATGATCGGGTTTGTGTGAAACTTGATTGGCTCGAGCAACTTAATCGACATTATGTTCAGGTGCAAGGAAGAGATCGTTTAGTTGTAAAATACATAGCACAGCAGCTGGGTCTGGATGGTTCTTACATTCCTCGTACCTACATCGAGCAAATTCAACTTGAAAAGCTTGTAAATGAGGTTATGGCCCTGCCAGATGATTTAAAGACAAAGCTTAGCCTCGACGAGGATTTGGTGTCAAGCCCGAAAGAAGCACTTTCTAGAGCCTCTGCAGATAGGGTTGCTATGAGAAATAAGCATATGAGGAGTGGCATGTCACAATCATACACAAACCAAAGGGAGAAGAATCTAGCCAAGCTAGCTTTATATGCTTCCAAGAATCGCGGGTTTGCTGAAAGAAATCTAGATTCGGCTTCTACACCATCAAATCAGGGAGCCGTCACTCAACTTTTCGAACAAATCTCTTCCCTTAATGATAGAATTGAGGAGTTCACAAATCAAATTGAAGAGCTGAACTCTAAGTTAACCATGAAGAAAAATTCTCCAAGCCAACAAAATATGTCACTCCAAGCTGACTCCTGCAATGGTTCTGCTCCCACGTCTTACTTTGTCACTAGTCTGAGCAATGGCTCCCTAACTGGATCCATTATGCCGAACTCCTCATCTTCATCGCAATTAGCTAAAGAGTCGCCTTTATTCGAAGAGATATCGGGTATAGCGCGGGGTCAGCGCCAGATTGTGCACCAACTCGACAGTCTCAATAATCTTCTGAGGGGGAGGTTGTCAGAGAAGTGTCAGTCTAGTAACAAAACAAGAACAAGCACGAAAACCATGGCGGCCAAATCGGAATCAGAATCTGAATCCTCCTCTGTGCCTATTATGGTGACAGTAGTTATTGGGTGTTTAGGGATCTTCTTGATGAAGGGTTTGTTGAGCAGAAACTGA 2013 0.4193 MAQDTTSDDLNSKRHGLLKDQVRLVKRKDSDRYEIAPIHDLLSFEKGFFIVIRACQVLAQKNDGIILVGLAGPSGAGKTVFTEKILNFLPGIEVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVHDLKAGKPVEVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRISVTGGVHLDLVKRVIRDIQRASQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIVNKFNPFTGFQNPTYILKSARNVTVDEVKAVFTEDHKETTEQTFDIYLLPPGEDPETCQSYLRMRNKEGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIAAILKRNSHVFCDDRVCVKLDWLEQLNRHYVQVQGRDRLVVKYIAQQLGLDGSYIPRTYIEQIQLEKLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHMRSGMSQSYTNQREKNLAKLALYASKNRGFAERNLDSASTPSNQGAVTQLFEQISSLNDRIEEFTNQIEELNSKLTMKKNSPSQQNMSLQADSCNGSAPTSYFVTSLSNGSLTGSIMPNSSSSSQLAKESPLFEEISGIARGQRQIVHQLDSLNNLLRGRLSEKCQSSNKTRTSTKTMAAKSESESESSSVPIMVTVVIGCLGIFLMKGLLSRN 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2882 670 Coils Coil 503 537 - -
Sto6g2882 670 Gene3D - 66 247 IPR027417 -
Sto6g2882 670 PANTHER URIDINE KINASE 8 649 - -
Sto6g2882 670 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Sto6g2882 670 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 8 649 - -
Sto6g2882 670 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Sto6g2882 670 MobiDBLite consensus disorder prediction 621 642 - -
Sto6g2882 670 Gene3D - 256 413 - -
Sto6g2882 670 CDD UMPK_like 67 239 - -
Sto6g2882 670 Pfam CYTH domain 269 404 IPR023577 -
Sto6g2882 670 PRINTS Uridine kinase signature 65 82 - -
Sto6g2882 670 PRINTS Uridine kinase signature 132 147 - -
Sto6g2882 670 PRINTS Uridine kinase signature 188 198 - -
Sto6g2882 670 PRINTS Uridine kinase signature 224 237 - -
Sto6g2882 670 SUPERFAMILY CYTH-like phosphatases 270 407 IPR033469 -
Sto6g2882 670 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 236 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2882 Sto-Chr6 36006689 36014807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2882 66 236 PRT Gene Family AT5G40870 27.778 3.16e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2882 K00876 - gmx:100781286 1086.25