Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2845 ATGGCTGGGTTGGAGGAATTGAGAAAAAAACTCGCACCTTTGTTTGATGCTGAGAAGGGCTTCTCAACAGATTCAACCTTGGACCCTTGTGATTCGTACACTGTAAGGCTCTCTGTCTCGtcatctgtgtgtgtgtttgAATTTATGGTGCAGTTATCAGATGGTGGAACTGTCAACTTATTGAGCAGATCTTATGGGGTGTACAATATCAATGAGCTTGGACTGCAAAAGTGCACGACTCGGTCCATAGATGAAGTTGACCATGGTGAAAAAACATATAGATGTGCTTCGCATGAGATGAGAATATTTGGAGCAATAGGTAGTGGTGCTAGTAGTGTTGTGCAGAGAGCTATACATATACCAACGCATAGAATTATAGCATTGAAGAAGATAAATATCTTTGAGAAGGAGAAAAGGCAGCAGCTTCTTACAGAAATAAGGACATTATGTGAAGCACCTTGCTACCAGGGTCTGGTTGAATTCCATGGGGCATTTTATACTCCAGACTCCGGACAGATAAGCATAGCTTTGGAGTACATGGATGGAGGATCACTTGCAGATATCTTAGGAATGCAAAGAAGAATACCTGAACCTACTCTTTCGACCATGTTTCAGAAGCTCCTACATGGGTTAAGCTATCTGCATGGAGTCAGACATTTAGTTCACAGAGACATAAAGCCAGCCAATTTACTTGTAAATCTCAAGGGGGAACCAAAAATTACTGATTTTGGTATCAGTGCTGGCTTAGAGAATTCAGTGGCTATGTGTGCTACATTTGTAGGAACTGTTACATACATGTCACCTGAGCGAATTCGAAATGATAGCTATTCTTTTCCTGCTGATATATGGAGCCTTGGTCTTGCTCTCCTTGAGTGTGGAACAGGAGAATTCCCTTATACAGCTAATGAAGGACCTGTCAATCTTATGTTGCAGATCCTTGAAGATCCATCTCCATCACCATCAAAACAAAAGTTTTCACCTGAATTCTGCTCCTTTGTTGGTGCTTGCTTACAGAAAGATCCAGATGCCAGGCCCACAGCAGAGCAGCTGCTTTTGCACCCCTTTATTACAAAGTATGAGAATGCCAAGGTAGATTTAGCAGGATTTGTTCGAAGTGTTTTTGATCCAACACAACGAATGAAGGACTTGGCAGATATGTTGACAATTCATTATTACTTACTATTTGATGGACCTGACGATCTTTGGCATCATACTAGGAGCTTATATAACGAAGGTTCAACTTTCAGTTTCTCTGGGAAACAATATGTTGGTCCGAACAATATATTCACAAAACTGTCCAGTATCCGAAGTACATTAGTTGGTGAGTGGCCTCCTGAAAAATTAGTGCATGTGGTTGAAAAGCTTCAATGTCGTGCCCATGGAGAAGATGGACTTGCAATTAGGGTTTCAGGATCCTTCATTATTGGGAATCAGTTCCTAATATGTGGAGATGGCATTCAAGTGGAGGGCTTGCCAAACATCAAGGATCTTGGAATTGATATTCCCAGCAAGAGAATGGGTACATTCCATGAACAGTTTGTCATAGAACCCACCAATCTCATTGGATGCTACTCCATAGCCAAACAAGAGCTGTACATAAACCAGTAG 1608 0.4098 MAGLEELRKKLAPLFDAEKGFSTDSTLDPCDSYTVRLSVSSSVCVFEFMVQLSDGGTVNLLSRSYGVYNINELGLQKCTTRSIDEVDHGEKTYRCASHEMRIFGAIGSGASSVVQRAIHIPTHRIIALKKINIFEKEKRQQLLTEIRTLCEAPCYQGLVEFHGAFYTPDSGQISIALEYMDGGSLADILGMQRRIPEPTLSTMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNDSYSFPADIWSLGLALLECGTGEFPYTANEGPVNLMLQILEDPSPSPSKQKFSPEFCSFVGACLQKDPDARPTAEQLLLHPFITKYENAKVDLAGFVRSVFDPTQRMKDLADMLTIHYYLLFDGPDDLWHHTRSLYNEGSTFSFSGKQYVGPNNIFTKLSSIRSTLVGEWPPEKLVHVVEKLQCRAHGEDGLAIRVSGSFIIGNQFLICGDGIQVEGLPNIKDLGIDIPSKRMGTFHEQFVIEPTNLIGCYSIAKQELYINQ 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2845 535 PANTHER - 2 534 - -
Sto6g2845 535 SMART serkin_6 100 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2845 535 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 2 534 - -
Sto6g2845 535 ProSiteProfiles Nuclear transport factor 2 domain profile. 383 533 IPR018222 -
Sto6g2845 535 SUPERFAMILY NTF2-like 381 533 IPR032710 -
Sto6g2845 535 ProSiteProfiles Protein kinase domain profile. 100 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2845 535 Gene3D Transferase(Phosphotransferase) domain 1 176 371 - -
Sto6g2845 535 CDD PKc_MAPKK_plant_like 101 361 - -
Sto6g2845 535 SUPERFAMILY Protein kinase-like (PK-like) 102 387 IPR011009 -
Sto6g2845 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Sto6g2845 535 ProSitePatterns Protein kinases ATP-binding region signature. 106 129 IPR017441 GO:0005524
Sto6g2845 535 Gene3D - 375 534 - -
Sto6g2845 535 Pfam Protein kinase domain 104 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2845 535 Gene3D Phosphorylase Kinase; domain 1 93 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2845 Sto-Chr6 35718519 35724033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2845 41 535 MAP Kinase Kinase Gene Family AT5G40440 77.980 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Sto6g2845 Pkinase 8.7e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2845 K20607 - gmx:100784935 952.199