Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2775 ATGGAGAATCATCCTTCTTCCTCCACCAATACTCAAAAACTCATCACTTCTTTCTCAAATCACACCTTTTTGGATCCAAACCTTAATAATCTTTCTTCTCAAACCTTACTGGAATTTTCTCCCACTCCTTCTGCTCAAAAGAACAAgGTGAGAAGAGAGAAAATCAATGAGAAGCTTAGGTGTTTGCAGGATTTGGTTCCAGGGTGCTACAagGCAATGGGAATGGCAGTAATGTTAGATGTCATAATAGATTATGTTCAGTCTCTGCAGCATCAGATTGAGCTAACAACAGCAAGTATGCATTTTGACTTCAACACTTTAGAGATGGATTATGCCACTCAAACCTCACAGAGTAATATAGGTACTTGTGAAGTTCAAGAGATGGAGAAGAAGATAGGGGAAGAAGGTTTTGGAGGGTACTCCTATAATTTTAATCCAACATGGAAACTtcgttaa 456 0.3772 MENHPSSSTNTQKLITSFSNHTFLDPNLNNLSSQTLLEFSPTPSAQKNKVRREKINEKLRCLQDLVPGCYKAMGMAVMLDVIIDYVQSLQHQIELTTASMHFDFNTLEMDYATQTSQSNIGTCEVQEMEKKIGEEGFGGYSYNFNPTWKLR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2775 151 SMART finulus 45 95 IPR011598 GO:0046983
Sto6g2775 151 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 49 134 IPR024097 GO:0006355
Sto6g2775 151 PANTHER TRANSCRIPTION FACTOR BHLH75 49 134 - -
Sto6g2775 151 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 39 89 IPR011598 GO:0046983
Sto6g2775 151 Gene3D - 45 101 IPR036638 GO:0046983
Sto6g2775 151 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 98 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2775 Sto-Chr6 34888431 34890635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2775 49 148 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 55.238 1.30e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2775 - - aprc:113869931 132.494