Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2733 ATGAACCAAACAATCCCCAAATCCCTCCCTTCTTCTCTTCTATCCACCCTCCTCTGTTTTCCTCTGTTTCTCTTCCCACTCATCCTCTGTTCTGTAAACCCAAAGTTCACAGCTTGTGAGCCCAAAACTTGTGGGAATGGCCAAAACATAAGCTACCCTTTCTACATAGATGGCAAACAGGACCCCTCTTGTGGGTTCCCTCGTTTTGGCCTCACTTGTGCTCCTGATGGCTTCCCCATACTCAATCTTTCAAGTTCCTACTTCATAATCCAACAAATCTTCTACCACAATCACTCCCTTCGAGTCTCCGATCCCCAATTCTCGGTCTCGAATGCGACCACCGAGTGTCTCTCTCGATCCCGGAACCTCACTCTGTATGGGAACAGGTATGAATTTGCTTCGAAACAGAAGGAGATCTTGTTGTTCTTCGATTGCGCGACGCCGGGGAAAGGGGAGGAGGAGTACAGAGTAGGGTGTGACAGGGGAAACAGGACAAGATCTGTGTTGGCTATGGATGATGGGAATGAGAAGATGGGGTATGCCATGGGGAGTTGTAAAGGAGGGTTCACGAGGACGATGGTGATGGAAGATGAAGGTGGAGGAGGGTTTGGGAGTGGAAGAGAAGGGATTTGGGAGGCTTTGAGAAGAGGGTTTGTGTTGGTTTGGAAAGTTACAGAGTGTGAAGGGTGTGAACAGAGTGGAGGAAGGTGTGGGTTTGATATGGAGTCCTTTAGCTTTAGGGAATATTATGTTTCTCTTGTCTCTAGAATAGGAAGGAGTGGGCATTTAATTATCCATGTGGGAAGTGGGAACAGCATGCAAGAGATAAGAGAAAAACAGTATGGCTCTCAAGCTGGGACTGGGATTAGTACAGGTTTAGGTATTGGAGTCCCTTTATTGGTAGCAATTGGGATAATTGTATTTTGCTGGAAACGAAAATATGGTAATTCAAAAATTGAATATCGATCAAGAAGAAGAGATGGCGATCCCTATTTAAATTCAGACACAGAAGAAGGAAGCAATTTATACTTTGGAGTCCCAGTTTTCTCCTACACAGAACTTGAAGTAGCAACCAACAATTTTGACCATACCAGAGAACTTGGAGATGGAGGATTTGGCACTGTTTACTATGGAAAACTCCAAGATGGACGAGAAGTAGCCGTGAAGCGTCTATACGAGCAAAACTTCAAACGAGTAGAGCAATTCATGAACGAAGTCAAGATCCTCACCCGCCTCCGCCACAAAAACCTCGTCTCCCTCTACGGTTGCACCTCCCGCCACAGCCGCGAGCTCCTCCTCGTATACGAATACATCCCGAACGGCACCGTGGCCCACCACCTCCACCTCCATAGCGACCCCACCAAGCCCACCGTCCTCCCCTGGCCCACCCGCATGAAGATCGCCCTCCAAACCGCCACCGCGCTCGCCTACCTCCACGCCTCCGACATCATCCACCGCGACGTCAAGACCACCAACATCCTCCTCGACGACGGATTCAACGTAAAAGTGGCCGACTTCGGGCTGTCGAGGTTGTTTCCAAGCAACGTCACGCATGTTTCCACGGCTCCCCAGGGGACTCCCGGGTATGTGGACCCGGAGTACCACCGGTGTTACCAGCTGACGAGCAAGAGTGACGTGTATAGCTTCGGGGTGGTCCTGATCGAGCTCGTGTCGTCGATGGCGGCCGTGGACATGAGCCGGGATAGGGACGAGATAAACCTGTCCAGCTTGGCGGTGAGGAAGATTCAGAGGAGTGAGTTGGGGGAGTTGGTGGATCCTtctttagggtttgagagagATGGGGAGGTTAGGAGGATGGTAGGGTTGGTGGCTCAATTGGCTTTTCAATGTTTGCAAAGGGATAAAGAGTTGAGACCTTCCATGGATGAAGTTTTGGAGGTTCTGAACAGGATCGAAGGGGAAaacaggaatgagaatgagaataagaataagaatgaTGACGGTGAGATACATGAGGGTACTTCACCATTGCATAATGGGGATGGATATGATGAGGTTGGTTTGTTGAAGAATATGAAGATACCACCTTGTTCTTCTCCCAATAGTGTAGCTGACAAATGGGAAAGCAAAACTACAACTCCCAATGTGAGTGcttga 2118 0.4802 MNQTIPKSLPSSLLSTLLCFPLFLFPLILCSVNPKFTACEPKTCGNGQNISYPFYIDGKQDPSCGFPRFGLTCAPDGFPILNLSSSYFIIQQIFYHNHSLRVSDPQFSVSNATTECLSRSRNLTLYGNRYEFASKQKEILLFFDCATPGKGEEEYRVGCDRGNRTRSVLAMDDGNEKMGYAMGSCKGGFTRTMVMEDEGGGGFGSGREGIWEALRRGFVLVWKVTECEGCEQSGGRCGFDMESFSFREYYVSLVSRIGRSGHLIIHVGSGNSMQEIREKQYGSQAGTGISTGLGIGVPLLVAIGIIVFCWKRKYGNSKIEYRSRRRDGDPYLNSDTEEGSNLYFGVPVFSYTELEVATNNFDHTRELGDGGFGTVYYGKLQDGREVAVKRLYEQNFKRVEQFMNEVKILTRLRHKNLVSLYGCTSRHSRELLLVYEYIPNGTVAHHLHLHSDPTKPTVLPWPTRMKIALQTATALAYLHASDIIHRDVKTTNILLDDGFNVKVADFGLSRLFPSNVTHVSTAPQGTPGYVDPEYHRCYQLTSKSDVYSFGVVLIELVSSMAAVDMSRDRDEINLSSLAVRKIQRSELGELVDPSLGFERDGEVRRMVGLVAQLAFQCLQRDKELRPSMDEVLEVLNRIEGENRNENENKNKNDDGEIHEGTSPLHNGDGYDEVGLLKNMKIPPCSSPNSVADKWESKTTTPNVSA 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2733 705 Pfam Wall-associated receptor kinase galacturonan-binding 39 104 IPR025287 GO:0030247
Sto6g2733 705 Gene3D Transferase(Phosphotransferase) domain 1 438 662 - -
Sto6g2733 705 SMART serkin_6 361 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2733 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Sto6g2733 705 MobiDBLite consensus disorder prediction 642 705 - -
Sto6g2733 705 Pfam Protein kinase domain 363 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2733 705 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 696 IPR044652 -
Sto6g2733 705 Coils Coil 628 648 - -
Sto6g2733 705 SUPERFAMILY Protein kinase-like (PK-like) 335 638 IPR011009 -
Sto6g2733 705 MobiDBLite consensus disorder prediction 682 705 - -
Sto6g2733 705 Gene3D Phosphorylase Kinase; domain 1 333 437 - -
Sto6g2733 705 ProSiteProfiles Protein kinase domain profile. 361 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2733 705 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 696 - -
Sto6g2733 705 Pfam Wall-associated receptor kinase C-terminal 180 247 IPR032872 -
Sto6g2733 705 MobiDBLite consensus disorder prediction 642 661 - -
Sto6g2733 705 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524
Sto6g2733 705 CDD STKc_IRAK 367 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2733 Sto-Chr6 34490302 34498949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2733 292 705 Receptor kinase-like Gene Family AT1G25390 59.233 3.39e-159 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sto6g2733 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2733 - - aprc:113872417 716.842