Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2705 ATGGGATTGCAAAACCAGTTAAACGACGTCGCTTCAGATTCGATTCCCCTCCTTCTTTTGGCTCTCTTCGCTAACTGCTTCAACCACCTCCGCTCCTTCCTCATCGGCTTCCTCCAATCCCTCGGCCTCTCGCGATTCCACTCCAGCGCCGTCGGATCCGGCCTCGCTAGCCTAATCGTTCTCTCCGAACAGCTCAATCTCAACCGCCGTGTCTCCTACCGATACTCCGTCCTCGAAAAATCCGCCGACGATGACGACAAGTGCGTCGTCTGCCAGAGTACTTTCAGGGATGGCGACCAGGTCCGACGGCTCCCGTGCCGCCACGTCTTCCATCGGCGCTGCTTCGACGGCTGGCTCGACCACCTCAAGTTCAACTGCCCGCTCTGCCGCTCGCCGCTCGTCGGAGACGAGCGCGTGGCCTTCGCGGAGCGGCGCGTCGGTTCCGACCTCGTTTCCTGGTTTTCGGTGCGGTGA 474 0.6076 MGLQNQLNDVASDSIPLLLLALFANCFNHLRSFLIGFLQSLGLSRFHSSAVGSGLASLIVLSEQLNLNRRVSYRYSVLEKSADDDDKCVVCQSTFRDGDQVRRLPCRHVFHRRCFDGWLDHLKFNCPLCRSPLVGDERVAFAERRVGSDLVSWFSVR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2705 157 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHA2A 1 155 - -
Sto6g2705 157 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Sto6g2705 157 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 155 - -
Sto6g2705 157 SMART ring_2 88 129 IPR001841 -
Sto6g2705 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 144 IPR013083 -
Sto6g2705 157 SUPERFAMILY RING/U-box 75 134 - -
Sto6g2705 157 Pfam Ring finger domain 86 130 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2705 Sto-Chr6 34230580 34231092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2705 1 156 C3H Transcription Factor Family AT1G15100 50.318 2.24e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2705 K16282 - zju:107413314 219.164