Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2622 ATGAGAATCCAATGTACTCATCACCtctccctcctcctcctcctcctcacaCCCACCACCATCTTCCACCACCTCCTCCCTACGCCCACCCTCGTCGAAGCTTCCATCCAAttcaccaccaccgccaccaccgaTGACGACCCGGCCACCGCCACTTTCCTCCGTACAAGTTGTGGCACCACCCTCTACCCTGACCTATGCTACTCCTCCCTCTCTCGCTACTCCAACGCCATCCGGCAAAACCCCGGAGCGCTCGCTCGCGTCGCGGTGGCCGTAAGCCTCTCCAAGGCGCACCGCATGGCGTCCTACATCTCCCGGCTCTCCGGCGAGGCCGACTACGGCCTCGACTCCCGGGCCGCCTCGGCCCTCCGCGACTGCTTCAGCAACCTCGGCGACGCCGTGGACGAGATACGCGGCTCGCTGAAGCAAATGCGCCAAATAGGAGGCGCCGGCGCCGCCAGCGTGGGCCGCGGCGGCGGCGAGCAGTTCAGGTTCCAGATGAGCAATGTGCAGACGTGGATGAGTGCGGCGTTGACGGATGAGGACACGTGTACGGACGGATTCGAGGATGTACCGGAAGGTAGTGTGAAGACGgatgtatgtgatagggttacCTACGTGAAGAAGTTCACTAGCAATGCTCTAGCGTTGAGAAATATCTTGGACGAGCCATCGAGCGTGGTGAAGCATTCACCTAAGCGAAGGAGCTTGCTTTGTCGAAAACCACTACTCCAAGTGTTCGTTAAAAGTCTTGAAGCTCTGATTTTGAATCCTGACGCTTTGAGTCTGGCAATGATCAAAGGGTCGGGGGTCCAATCTATGGGTTATGTATCGGATTTACCTCAAGCAGTGTTTGCTTCGGTTACCTTTGTGAGTCCTTCGTTGAGAGTGGTGGCCATGACTTCTTTTGTGGCTGTGGTGGATATGGATTCTCCTGCTGACGTTTTGGGAATTGTAATAGGTGGAGGCACTGTTATCTCTTCTGCGCCTAAGGTTTGTCCTAGGGAGAAAGAGGAGAATAAACATGCTCGTGCAGGTGACAATGTCACTATGTCCCCCAGGAAGGAGATGCCTCACGATGCTATCGAAAATGAAGGCGAGATTCTTATGCCAGGAGGACGGGAAAATTCAGTTCGAGAAGGATCTGACGAAGGCACTCAGGTAGCTCGTCGTGAGGGAAAGGAGTTGGTTATTAAGGATTCTCTTCCCCTTCCTTCAAGCTTTTCGGTGAATTTGGGGAGTCTCCGCCTTGAGGTAGACTTGGGTGAAGGAGTGCTCCTGTTGAAGAATGATAGCACAGACGCCCTTAAGTCTTGA 1317 0.5186 MRIQCTHHLSLLLLLLTPTTIFHHLLPTPTLVEASIQFTTTATTDDDPATATFLRTSCGTTLYPDLCYSSLSRYSNAIRQNPGALARVAVAVSLSKAHRMASYISRLSGEADYGLDSRAASALRDCFSNLGDAVDEIRGSLKQMRQIGGAGAASVGRGGGEQFRFQMSNVQTWMSAALTDEDTCTDGFEDVPEGSVKTDVCDRVTYVKKFTSNALALRNILDEPSSVVKHSPKRRSLLCRKPLLQVFVKSLEALILNPDALSLAMIKGSGVQSMGYVSDLPQAVFASVTFVSPSLRVVAMTSFVAVVDMDSPADVLGIVIGGGTVISSAPKVCPREKEENKHARAGDNVTMSPRKEMPHDAIENEGEILMPGGRENSVREGSDEGTQVARREGKELVIKDSLPLPSSFSVNLGSLRLEVDLGEGVLLLKNDSTDALKS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2622 438 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 25 218 - -
Sto6g2622 438 Pfam Plant invertase/pectin methylesterase inhibitor 53 217 IPR006501 GO:0004857
Sto6g2622 438 MobiDBLite consensus disorder prediction 332 355 - -
Sto6g2622 438 TIGRFAM PME_inhib: pectinesterase inhibitor domain 38 221 IPR006501 GO:0004857
Sto6g2622 438 PANTHER PECTINESTERASE INHIBITOR-LIKE 25 218 - -
Sto6g2622 438 SMART PMEI_2 49 217 IPR006501 GO:0004857
Sto6g2622 438 MobiDBLite consensus disorder prediction 331 355 - -
Sto6g2622 438 CDD PMEI-like_3 56 217 - -
Sto6g2622 438 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 222 IPR035513 -
Sto6g2622 438 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 221 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2622 Sto-Chr6 33231471 33237342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2622 57 217 Carbohydrate Esterase AT5G53370 28.313 1.85e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2622 - - jre:108995512 241.121