Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2599 ATGGAAGGCTTTCTGGGTATTCTGAAAATTCGAATTAAAAAAGGAATTGACCTTGCCATTCGTGATACTTGTCATACTAGTGACCCTTATGTGGTTCTCAGAATGTACGAACAGAAATTGAGGACCAAAGTTGTAAAAGATGACTGCAATCCTGAGTGGAATGAAGAATTGACATTGTATTTGAAGAGAATCGATTCTCCAATTGAGCTAAACGTTTTTGACAAAGACACATACACTGAGGATGACCCAATGGGGAAAGCAGAGATAGACATAAAGCCATTACttgagtgtgcaaagatgaatGAAGAAGAATTGAATGATGTCCCAAATGGGTGTGTGGTGAAGAGAGTTCAACCTTCTAGAAACAACTACCTTTCTGATGAGAGCTGCATCACTTGGATTGATGGAAAACTTGTCCAAGAAATGTTCATTAGATTGAAAAATGTTGAGAGGGGTGAAATATTATTGGAGATTGAGTGGAATGATGAGAATTGTATTGGCTTATCAGGGGTTGAGTTATAA 522 0.364 MEGFLGILKIRIKKGIDLAIRDTCHTSDPYVVLRMYEQKLRTKVVKDDCNPEWNEELTLYLKRIDSPIELNVFDKDTYTEDDPMGKAEIDIKPLLECAKMNEEELNDVPNGCVVKRVQPSRNNYLSDESCITWIDGKLVQEMFIRLKNVERGEILLEIEWNDENCIGLSGVEL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2599 173 Pfam C2 domain 6 97 IPR000008 -
Sto6g2599 173 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Sto6g2599 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 160 IPR035892 -
Sto6g2599 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 163 - -
Sto6g2599 173 Gene3D C2 domain 5 165 IPR035892 -
Sto6g2599 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Sto6g2599 173 SMART C2_3c 7 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2599 Sto-Chr6 33037824 33040493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2599 39 169 C2H2 Transcription Factor Family AT1G70790 53.030 2.60e-46 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2599 - - gmx:100792328 206.068