Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2576 ATGACAAACAGATCAAGTAGATTGAAGCGGAAGCTAGAACTTCAAACTCCGCTGTGCATCAAAAAGAAGCTCCGGTCTAACCTACGTCGCCGGAGAAGATTCCAGATCTCTCCAGTCCTACTTGCGTCTAAGGAGGATTTCGAAGTTTCCGGAGAGAATCCTCGGGTTCCTGTGGTTTCAGTGGATTCGAGCTCTTGCTCGTCCTTCAATGGTGAAGTTTCGTGCAATTCGAAGAGGAAAGGAAGGTCGAATACGAGGAAGAAGATAGTAGGCGAAGCTGGAAGTTCTCGGAAGGATCAATGCGATGAGTTCTGGAGAAATCGGAGATTTGAGAAGCAGAATGATAGTGAAGTGGAGGTGTCTGAGTCTTCGTGTGTGGACTCGAATTCTGGAGTTCGTAAACAGAGGAGTTTGATTTTGAAGTTCAGGAGTGGAAAAGAAAGTGAGAATGTGAAAGAAACCGTAACAAATGAAGGTTCTGAAGCTTGTACGAAATCGGAAACTACTTGCGAATTGCAATGCTCCGGTGGAAACTCCAAGTCCGGCGCCGCGAATATTCAATTCTCGTCGGAGATCGCGGTAAACGATGTTGTTTCTGCTTGCTGTGGAGTAAGCGAAATTTTTGAGAAACTAGGAGAGGAGACGATCAGAGGAAAGGAGAACAGATCATCTGATTTTGAGTTCTCTCAAGTTTCAGGAAATCATCACGCCGATGAGAATAAGATCGAATTAAACCAGCAATCGAGCATAAAACAAGGCTCAAACCATTTTGTTGATGATTCTGATCTTGCTTGCACAGAGCAATTGTCGTACGAGGACGTCTCGATGTACTCTTCAAGTCAGGAAACCGCTTTTTCTGATCTCTACTCTGAGCTCTTCCCTGAATGCTCAGAGCTAGAAATTTCAGATTACTTTACTGATTCTGGAAGTCAATTCACAGAGGGCTCAGTGGGAGAAACTCCTTCTCCAACATTCTCTTTGTTCATTCAGTTCAAAGATGAATTTTCGACGTTGCCTTCACCAGATACCGGAATTACTCTATGCGTCGAGGATGATACCTCACTTCAAGCAGAATTTTTGAAGTTCGAAGATCAGGAGGATGAAGAAGGCTACCAAATGCTGAGAAAGAGAGAACGGAGGCAAGTATTCTACAGTAATTATGCAGAGAAGTATTCCAACACCGAGTACGGCAAGCTCGTTCTTCAGCAACGCTCGCAAATGATATACTGGATCGTTGAGCAATCTTGTCGAAAGGAGCTTCGGCATGAGACCATGTTTCTTGGAGTTAGCCTTCTTGATCGGTTCCTAAGCAAAGGCTTCTTCAAAACGAGAAGGAATTTACAGATTGTTGGAATAGCCTGCCTCACATTAGCCACCAGGATCGAAGAAAACCAGCCACATAACAGTGCCCCTGAGAGTAAGTACAGGGGAAATAGCGTGCGGCAAAAGAATTTCTGCATAGGAAGCTGTGTGTATAGTAGATGCGAAGTAGTGGCTATGGAATGGATAGTGCAGGAGGTCCTCAGCTTCCAATGTTTTCTGCCCACCATTTACAATTTCTTGTgGTTCTACCTAAAAGCTGCTAGAGCTGATCCAAAAGTAGAGAAGAGGGTCAAGTTCCTGGCTGTGCTGGCACTGTCATCTCATGAGCAGCTGTGCTACTGGCCCTCTACAGTTGCTGCTGCACTTGTAATCCTGGGTTGCTTAGAACTCAATCAAAATGGTTCCCACAAAGTCATCGGGATCCACGTGAGATCAAAAGATGAAAATTTGCATAAATGCATAGAGGGAAGAAAATTCGATTGTTCTGTCCGTGTAACTCTATTTCTTGTTGTAAACTGGCCATAG 1848 0.4437 MTNRSSRLKRKLELQTPLCIKKKLRSNLRRRRRFQISPVLLASKEDFEVSGENPRVPVVSVDSSSCSSFNGEVSCNSKRKGRSNTRKKIVGEAGSSRKDQCDEFWRNRRFEKQNDSEVEVSESSCVDSNSGVRKQRSLILKFRSGKESENVKETVTNEGSEACTKSETTCELQCSGGNSKSGAANIQFSSEIAVNDVVSACCGVSEIFEKLGEETIRGKENRSSDFEFSQVSGNHHADENKIELNQQSSIKQGSNHFVDDSDLACTEQLSYEDVSMYSSSQETAFSDLYSELFPECSELEISDYFTDSGSQFTEGSVGETPSPTFSLFIQFKDEFSTLPSPDTGITLCVEDDTSLQAEFLKFEDQEDEEGYQMLRKRERRQVFYSNYAEKYSNTEYGKLVLQQRSQMIYWIVEQSCRKELRHETMFLGVSLLDRFLSKGFFKTRRNLQIVGIACLTLATRIEENQPHNSAPESKYRGNSVRQKNFCIGSCVYSRCEVVAMEWIVQEVLSFQCFLPTIYNFLWFYLKAARADPKVEKRVKFLAVLALSSHEQLCYWPSTVAAALVILGCLELNQNGSHKVIGIHVRSKDENLHKCIEGRKFDCSVRVTLFLVVNWP 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2576 615 PANTHER CYCLIN-SDS 4 596 - -
Sto6g2576 615 PANTHER CYCLINS 4 596 IPR039361 -
Sto6g2576 615 Pfam Cyclin, C-terminal domain 515 596 IPR004367 -
Sto6g2576 615 SMART cyclin_7 409 506 IPR013763 -
Sto6g2576 615 Gene3D - 394 508 - -
Sto6g2576 615 SUPERFAMILY Cyclin-like 515 595 IPR036915 -
Sto6g2576 615 CDD CYCLIN 514 588 IPR013763 -
Sto6g2576 615 CDD CYCLIN 404 504 IPR013763 -
Sto6g2576 615 ProSitePatterns Cyclins signature. 404 435 IPR006671 -
Sto6g2576 615 PIRSF Cyclin_A_B_D_E 367 597 IPR039361 -
Sto6g2576 615 PIRSF Cyclin_A_B_D_E 50 283 IPR039361 -
Sto6g2576 615 Gene3D - 509 601 - -
Sto6g2576 615 Pfam Cyclin, N-terminal domain 371 510 IPR006671 -
Sto6g2576 615 SUPERFAMILY Cyclin-like 366 511 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2576 Sto-Chr6 32805491 32811582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2576 404 575 Core Cell Cycle Gene Families AT5G25380 34.270 1.85e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2576 K21777 - gmx:100817658 551.592