Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2566 ATGAAGATAGGGTGGGACCTTAAGAGGGGACTGAACCGCCGTCTTACGGCGTGGAAGAGGTGGGACGATCCTTCTCCGGGGGACTTCAGTTGTGGGGTTGTGATGGGTGTTGTTCCTGAGTTGGTGATGTGGAGGAATGGCTCACAACTCTACCAAAGGAGTCCTTGGAATGGGGTTTTGTTAGGTGGCAAGAACACTTCCGTTTTTGGCTTGCAATTTATTGTCAATCAAGATGAGGTGGTTTACACTTCCCAAGTCCAAGACAAATCAGTGATCACAAGAGTTGTTCTAAACCAAACCAATTACCACCGCGAACGCTATCTTTTggacccaaaaacccaaacttGGAACCTCTATTCCACCGTACCCAAAGACAACTGCGACAGTTACAATCCCTGTGGACCCAACGGGAACTGTGTGGCCACCGACTCGCCACGCTGCCACTGCCTCGCAGGATTCGATCCGAAGTCCGTCGACAGTTACAACGCCTTGGATTGGGCTCAAGGATGTGTTCGCACTGAAGGGTGGATTTGTGGGGTCAAAAACAAAGATGGGTTCAGGAAATTTAGTGGGTTGAAAGTGCCCGATACGGCAAAATCTTGGGGTGATAGTGGGATGGGAATCGAGGATTGTAGGGATAAATGCTGGAAGAATTGTTCGTGTACGGCGTATTCGAACATGTACTTTGGTGGAGGAGGTAGTGGGTGTCTGCTTTGGTTTGGGGATCTCTTGGATTTGAGAGTGGCTACGGTTCCTGGGCAGGATTTGTATGTTAGGATGGCGGTTTCGGATACGGGTATGTATATGAACTCTATCAATTTCATCTCTTTAATTTCACGAAAGATTCtatgtttttgtttatttatgttAAGCTCATTTAggttacaatataatgaagatGATACAGAGAAAATCACAACAAATAATAGAGATGAAGGCGAACAAGAAGACTTGGAGCTACCATATTTTGACCTTCCTACAATTGTTCAGGCAACTAATGATTTCTCAAGTGACAATAAACTAGGCCAAGGTGGATTTGGACCTGTAtacaagggtaCACTAGGAGATGGACAAGAGATTGCTGTGAAGAGGCTATCCCAGAGCTCTGGACAAGGATTACAAGAATTTAAGAATGAAGTGATAATGTGTGCCAAACTTCAACACCGAAATCTTGTTAAGGTTCTTGGTTGTTGCATTGAAGGAACGGAGAAAATGCTCGTATATGAATACATGCCAAACAAAAGCCTAGATTCTGTTCTTTTCGgTTGTCCTCAAAATAAATCCCTAAATTGGACTCAGCGCTTTCACGTTATATTTGGAATCGCTCGAGGACTCCTTTATCTTCATCAGGATTCTAGACTAAGGATCATACACAGAGATCTGAAAGCAAGTAACGTTTTGTTAGATAGAGAGTTGAATCCAAAAATTTCAGATTTTGGCATGGCTAGAATGTTTAGAGGAGACCAAATCGAAGGAAATACCAACAGAGTGGTCGGCACGTATGGATATATGGCACCAGAATATGCTGTTCACGGACTATTCTCTACTAAATCTGATGTGTTTAGCTTTGGTGTATTATTACTCGAGATAATCAGTGGAAAGAAAAATCGAGGAGCTTCCTATCCAAACTATGGTTTCAATCTTATTGGACATgCATGGAAATTGTGGAATGAGGGCAACACAAAGGAATTAGTTGATTCCTCTTTAGGGGATGCTTTTAATTTATTGGAAGTATTACGATGCATTCATGTTAGTCTTCTGTGTATGCAACAACATCCTGAAGATAGGCCAAACATGGACTTAGTACTTGTGATGCTGAGCAGTGAATGTAACTTGCCTCAACCAAAGGAGCCTGGTTTCCTAATAGAAAAGACCTCAATAGAAGGAGAATATTCATCTAACAAGCAAATGATGTTTTCCTCAAGTAATGAAATAACTATGACCCTGCTTCAAGCTAGATAA 1962 0.4113 MKIGWDLKRGLNRRLTAWKRWDDPSPGDFSCGVVMGVVPELVMWRNGSQLYQRSPWNGVLLGGKNTSVFGLQFIVNQDEVVYTSQVQDKSVITRVVLNQTNYHRERYLLDPKTQTWNLYSTVPKDNCDSYNPCGPNGNCVATDSPRCHCLAGFDPKSVDSYNALDWAQGCVRTEGWICGVKNKDGFRKFSGLKVPDTAKSWGDSGMGIEDCRDKCWKNCSCTAYSNMYFGGGGSGCLLWFGDLLDLRVATVPGQDLYVRMAVSDTGMYMNSINFISLISRKILCFCLFMLSSFRLQYNEDDTEKITTNNRDEGEQEDLELPYFDLPTIVQATNDFSSDNKLGQGGFGPVYKGTLGDGQEIAVKRLSQSSGQGLQEFKNEVIMCAKLQHRNLVKVLGCCIEGTEKMLVYEYMPNKSLDSVLFGCPQNKSLNWTQRFHVIFGIARGLLYLHQDSRLRIIHRDLKASNVLLDRELNPKISDFGMARMFRGDQIEGNTNRVVGTYGYMAPEYAVHGLFSTKSDVFSFGVLLLEIISGKKNRGASYPNYGFNLIGHAWKLWNEGNTKELVDSSLGDAFNLLEVLRCIHVSLLCMQQHPEDRPNMDLVLVMLSSECNLPQPKEPGFLIEKTSIEGEYSSNKQMMFSSSNEITMTLLQAR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2566 653 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 646 - -
Sto6g2566 653 Pfam S-locus glycoprotein domain 51 157 IPR000858 GO:0048544
Sto6g2566 653 SMART ntp_6 181 260 IPR003609 -
Sto6g2566 653 ProSiteProfiles EGF-like domain profile. 123 159 IPR000742 -
Sto6g2566 653 Gene3D Transferase(Phosphotransferase) domain 1 411 616 - -
Sto6g2566 653 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 646 - -
Sto6g2566 653 ProSiteProfiles Protein kinase domain profile. 335 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2566 653 Pfam PAN-like domain 178 246 IPR003609 -
Sto6g2566 653 Gene3D Phosphorylase Kinase; domain 1 296 410 - -
Sto6g2566 653 ProSiteProfiles PAN/Apple domain profile. 178 261 IPR003609 -
Sto6g2566 653 CDD EGF_CA 125 153 - -
Sto6g2566 653 Pfam Protein tyrosine and serine/threonine kinase 338 600 IPR001245 GO:0004672|GO:0006468
Sto6g2566 653 SMART serkin_6 335 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2566 653 CDD PAN_AP_plant 181 261 - -
Sto6g2566 653 CDD STKc_IRAK 341 606 - -
Sto6g2566 653 SUPERFAMILY Protein kinase-like (PK-like) 317 614 IPR011009 -
Sto6g2566 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Sto6g2566 653 Pfam Domain of unknown function (DUF3403) 607 653 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2566 Sto-Chr6 32711601 32718377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2566 270 623 Receptor kinase-like Gene Family AT4G23230 53.482 9.33e-125 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto6g2566 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2566 - - gmx:100790436 807.364