Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2563 ATGTCATTAAAAGTCACCCAGAACAATCCAAGGACAAGTAATGCCTTGGCTAATGTTCGACAGATGATTCCAAAGAAGTTCTCTCGAGTTAATTCTCGGGCTGGCATACACAGATGTAAAAACCCAGATCTCATCATTCTTCCTGACCGAGATAACTCTGTACTGAAGGCATTCTCCAAGATCTTGGCAAGGGCAGAGGTTTGCTCAGGGATTGGAGAGGgaatcggagctaaaacagcTTGTTCCTTGTCCTATTCTCGAATCTCCTCTGGAAAACGAGCCCACACCAAGGTCTTCTCGATCTCATTCGTTTCAGGGTGGAAATCAGGAGCCCATTTCCTAACGATTAGAGGATCTCCCGGCGGCCATCCTGGATTTGGGGTCATTACCGttACCATACGTTCTGATGCTAGGATTGCTTTAAATCTGCTACAAGAGGAGAAAGTGTTGTCTTCTGATCAAAGCCCAAGTTCTGCCATGAAGGCAATAAAAAGTGGTGCTTGCTATTATATGATTAAACCTATTAGTGAGGAAGCACTTGGGAATATATGGCAGCATGCTTGGACAAGGAAACTTATGAATGAGAAGAAAAATAATCATGAAAGCTCTTGCTCTAATATGGATGATTACAACAATcatcattataataataaacaattaGTACCATATTATGATCATAATAATGGTGATGAAACCCAACTTTGTACCTCTCTATTATTTGATGATTCTTCTAGAGAAGCACCCACAAAGAGAAACTCCATCAATGGCgtcaaagaagaagatgaaggtgAGTTGTTAAATAACGACGAACCGCTGCCGAAGAAGCGGCGCGTAGTCTGGTCCGACGAGCTCCACGATCTATTTGTCAGAGCTGTGAACCAACTCGGAGAAGAAAGGGCTGTGCCAAAGGCAATTCTTGAATTGATGAATGTCCCTGGTTTGCACAGAGAAAATGTTGCAAGTCATTTGCAGAAATATAGGCTAcatttaaagagaaaaaatgagCTCGACCTGGATCGctacaaccaccaccaccatgagATGAACAATGCAACAACAATGCCAAATATTAATAGTACAACCTCTGTTGTCTCTTCAGAACCTAACCTTGAAAGATCAAACATGGAAATTACAACATTATTGGAACAAGTTTGTCCTCCTCAACCTATTAATGTTCTTCCTCTTCGTCACCACCACCAGCACCACCAGCACCATCACCAGCACCAGCATCAGCAGCTCGTACTCCATAATCGTAGTCATCCAACGACGATGGACTATAAAATGTCGCATCCAGAACACTCCATCAAGATCAATTCTCATCATAATAGTAATTACTCCAATGTTACAGAAGTAGTAGCTTCTTCTAATTCTTCTGAGGGGCCAAACAAGAATATTGGAGGAATGATGAGCAGTACCATATTAGAGTTGTTTCAGCAAGGAATTCTTCATCATCAGCAGCTAAAGCAAATGAGACATCATAATagtgacaataataataataatattaatgtttatAATTCTTCATTGGATAATACTGTAAACATTCCTAGTGGATATATGAGAGTTCCTAATTCGGACACtatttcttcatcatcatcaacatctCTTTGCTCAGTACAAAACTCATCAGCCTTTGTTCTTCATGAGGATGAAGTAGTATTTGATCAAGTTGGAGTGGGATTTCTTTGGAATAATCATGGATATAATAATAATCCCTCTAATTTTGTAGATAGCAATTGTGATAACTTGGTGAATAATGAGTCTAATGTGGATTTGATGGGTGATCTACAAGAGCCTTCTCCATTGCTGCAGAAATATTCATCCCTTGATCATTACATCTTCATGGATAAATAG 1854 0.3706 MSLKVTQNNPRTSNALANVRQMIPKKFSRVNSRAGIHRCKNPDLIILPDRDNSVLKAFSKILARAEVCSGIGEGIGAKTACSLSYSRISSGKRAHTKVFSISFVSGWKSGAHFLTIRGSPGGHPGFGVITVTIRSDARIALNLLQEEKVLSSDQSPSSAMKAIKSGACYYMIKPISEEALGNIWQHAWTRKLMNEKKNNHESSCSNMDDYNNHHYNNKQLVPYYDHNNGDETQLCTSLLFDDSSREAPTKRNSINGVKEEDEGELLNNDEPLPKKRRVVWSDELHDLFVRAVNQLGEERAVPKAILELMNVPGLHRENVASHLQKYRLHLKRKNELDLDRYNHHHHEMNNATTMPNINSTTSVVSSEPNLERSNMEITTLLEQVCPPQPINVLPLRHHHQHHQHHHQHQHQQLVLHNRSHPTTMDYKMSHPEHSIKINSHHNSNYSNVTEVVASSNSSEGPNKNIGGMMSSTILELFQQGILHHQQLKQMRHHNSDNNNNNINVYNSSLDNTVNIPSGYMRVPNSDTISSSSSTSLCSVQNSSAFVLHEDEVVFDQVGVGFLWNNHGYNNNPSNFVDSNCDNLVNNESNVDLMGDLQEPSPLLQKYSSLDHYIFMDK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2563 617 Pfam Myb-like DNA-binding domain 277 327 IPR001005 -
Sto6g2563 617 MobiDBLite consensus disorder prediction 246 269 - -
Sto6g2563 617 SUPERFAMILY CheY-like 149 196 IPR011006 -
Sto6g2563 617 SUPERFAMILY Homeodomain-like 273 332 IPR009057 -
Sto6g2563 617 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 275 329 IPR006447 GO:0003677
Sto6g2563 617 Gene3D - 272 333 - -
Sto6g2563 617 Gene3D - 130 214 - -
Sto6g2563 617 MobiDBLite consensus disorder prediction 349 368 - -
Sto6g2563 617 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 272 331 IPR017930 -
Sto6g2563 617 PANTHER TWO-COMPONENT RESPONSE REGULATOR 150 485 - -
Sto6g2563 617 PANTHER TWO-COMPONENT RESPONSE REGULATOR 150 485 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2563 Sto-Chr6 32645342 32653593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2563 149 351 Response Regulator Gene Family AT3G16857 39.409 8.20e-33 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto6g2563 Myb_DNA-binding 6.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2563 - K14491 dcr:108204614 151.754