Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2550 ATGGGCGTTCTCAATGCTCTCAGATCTTCGAAGCTTATCTCATGGAAACCCgtaaatACTGGCAGGCTTCAGCAAACCCTAGCGGGTTGTGTAGAGCGGAGAGGCAAGACTTTACACTCTGGAAAGGATTCAACAGTGAAACTGTGTCCGGGACTTGCAGGCGAAGGGAGGTACTTTGCTTTTAGGTCCAATTCGATACCAGCTTTGATCGATTTTGCTCAAGAGTCACCTCTCTGCACCACATTGTGTAAAGATGGTTTTAGAATACAAACTATTGAGCACTTGCTTTCTGCTTTGGAGGCAACTGGTGTTGATAATTGCAGAATTGTGGTAGATAATGTGGATTCTGAAGGACATTGTGCCGAGATTCCTATATTTGATGGGTCGGCAAGTGAGTGGGTGGCAGCAGTGGAGGAAGTTGGTTTAAAGGTGGCAACTGATCATCATGGCAATAGTTGTGAAAAATTAGCACCACATTTGAATGAACCAATGTTTACTTGGAGGAATGATTCTTTTGTTGCTGCATTCCCTTCAAAAGTGCTTCGAATGACTTATGGCATTAACTTTCCACAGGCACCTGCTATTGGCTGCCAGTGGTTTTCTACAATCCCCTTGGACAATTTGGTTTATTGTAAACAGATAGCTTTGTCAAGAACTTTCTGCATTTATGAGGAGATTGAGCAAATGCGCAGTGCTGGACTGATTAAAGGGGGTTCTCTAGATAATGCCATTATTTGCAGTACACGTAATGGTTGGTTGAATCCACCTCTGCGTTTCAATGATGAACCATGCCGCCATAAGGTCTTGGATCTTATTGGTGATCTTTCCCTTTTTGCTCAATTTGGACATCAAGGACTTCCAGTGGCACACATCGTAGCTTACAAGGGTGGCCATAAATTGCATGCTGATTTGGTGCGCCGCTTAATAGGATAG 933 0.4362 MGVLNALRSSKLISWKPVNTGRLQQTLAGCVERRGKTLHSGKDSTVKLCPGLAGEGRYFAFRSNSIPALIDFAQESPLCTTLCKDGFRIQTIEHLLSALEATGVDNCRIVVDNVDSEGHCAEIPIFDGSASEWVAAVEEVGLKVATDHHGNSCEKLAPHLNEPMFTWRNDSFVAAFPSKVLRMTYGINFPQAPAIGCQWFSTIPLDNLVYCKQIALSRTFCIYEEIEQMRSAGLIKGGSLDNAIICSTRNGWLNPPLRFNDEPCRHKVLDLIGDLSLFAQFGHQGLPVAHIVAYKGGHKLHADLVRRLIG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2550 310 SUPERFAMILY Ribosomal protein S5 domain 2-like 162 309 IPR020568 -
Sto6g2550 310 Gene3D lpxc deacetylase, domain 2 159 310 IPR011334 GO:0008759|GO:0009245
Sto6g2550 310 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 24 308 IPR004463 GO:0008759|GO:0009245
Sto6g2550 310 Gene3D lpxc deacetylase, domain 1 22 149 IPR015870 GO:0008759|GO:0009245
Sto6g2550 310 SUPERFAMILY Ribosomal protein S5 domain 2-like 23 143 IPR020568 -
Sto6g2550 310 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 24 309 IPR004463 GO:0008759|GO:0009245
Sto6g2550 310 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 4 309 IPR004463 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2550 9 308 Carbohydrate Esterase AT1G25054 64.000 1.19e-142 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2550 K02535 - gmx:100814465 497.278