Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2533 atgtcttcttcttcttcaccgtTCTTTGGAGTGACGAGAGAGGAAAATCCTGTGCATCAGATGACACAACACCACCACTTATCCTCTTCCACATCTGCTAATTCCTCAACCTCCACACTTCCTCAAAAGAAAAGGAGGAATCAACCAGGAACACCAAGCAAGAGAGGGCACAACCTGCCTTGGAAGCTGAAGCAGAAGAGCACGAAGGAGCCGAGGCGGAAGGTGTATCTGTGTCCCGAGCCGACGTGCGTCCACCACGACCCGTCCCGGGCTCTCGGCGACCTCACCGGAATCAAGAAGCACTACTCGCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGAGAAATGCTCGAAGAAATACGCCGTCCAGTCCGATTGGAAGGCACATTCCAAGACTTGTGGCACCAGAGAGCGTGACAGTTTCATCACACACAGAGCCTTCTGTGATGCCCTAGCACAAGAGAGTGCAAGGAACCCTACCTCCTTGAACCCATTAGggactcatcatcatcatctctatGGAACaaaccaccaccaacaccacatGAGCTTAGGGCTACTTCATCAGAACCAAAACCCTACTTCTAACACAAGCATGTTGCGTCTGATCCCACCTTCTTCCAACCACCCTCCATTCGGAGTCCAATCGTCGCCGGCCGCCGCCCAGTCCCCCATCATGCCGGCCTCCCCGGCTTTCTTCGTCGCGGATCCGATCCCGAGCCAAGGATACCATCAACAACAACAGCAACAACAACAAGGGACATTGTTCTCATCAAGCAATAATAAGCCAATGGTGCATGGACTCATGCAACTTCCTGATCTTCAAGGAAACCCTAATAACAACACCACTTCCTCCAATAATCTTTTCAACCTTGCCTTCTTTCCCACTGGCAATAATAACATCAACAACGGCGCCGCCTTGATCTCCGACGACGACCCGTTCGGTAACCCTATCGGCGCTGGCGATGATACTCAAGGCGTCGGCTCCGGCTTACTCTTTGCCGCCGGCAATAATTCCATGCAACAACACGAAAATGTGTCGTCGCCACATATGTCGGCGACCGCATTGCTTCAGAAAGCGGCTCAAATGGGATCAACCACAAGCACCACCAACAACAATAGTAGTAGTACCGGAGGAGATGGGATTATAAGATTATCGGGCTCGGAAAATGATGACCAGcatcatcgtcatcatcatcagcaGCTACGAGGATTGATGAACTCTCTTGCTAATGGGAACACTTCCATATTTGGAAATGTGACGCAAGTACAAgggaataacaataataataacaataatgatcttcaccatcatcatcatcatcatcagtctAATTTGCAGCAACAAAATGTGGGTGTGACAGTGAGCTTTGGTGGGTCTGATAAGCTGACGTTGGACTTTCTGGGTGTTGGAGGAATGGTCAGAAACTTGAATGCTGCATATTCACACAGAGAAGTACCACAACAACATGCTGCCATCAATAATAATATCACTTCTTTGGAACCtgaacatcatcatcatcatcatcatcatcatcaggcAAGCCAACCTTTTACTAGCACCAAGCTGCAATGA 1575 0.4438 MSSSSSPFFGVTREENPVHQMTQHHHLSSSTSANSSTSTLPQKKRRNQPGTPSKRGHNLPWKLKQKSTKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTRERDSFITHRAFCDALAQESARNPTSLNPLGTHHHHLYGTNHHQHHMSLGLLHQNQNPTSNTSMLRLIPPSSNHPPFGVQSSPAAAQSPIMPASPAFFVADPIPSQGYHQQQQQQQQGTLFSSSNNKPMVHGLMQLPDLQGNPNNNTTSSNNLFNLAFFPTGNNNINNGAALISDDDPFGNPIGAGDDTQGVGSGLLFAAGNNSMQQHENVSSPHMSATALLQKAAQMGSTTSTTNNNSSSTGGDGIIRLSGSENDDQHHRHHHQQLRGLMNSLANGNTSIFGNVTQVQGNNNNNNNNDLHHHHHHHQSNLQQQNVGVTVSFGGSDKLTLDFLGVGGMVRNLNAAYSHREVPQQHAAINNNITSLEPEHHHHHHHHHQASQPFTSTKLQ 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2533 524 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 54 484 - -
Sto6g2533 524 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 2 53 - -
Sto6g2533 524 MobiDBLite consensus disorder prediction 360 401 - -
Sto6g2533 524 MobiDBLite consensus disorder prediction 502 524 - -
Sto6g2533 524 MobiDBLite consensus disorder prediction 421 446 - -
Sto6g2533 524 MobiDBLite consensus disorder prediction 242 261 - -
Sto6g2533 524 MobiDBLite consensus disorder prediction 360 383 - -
Sto6g2533 524 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 2 53 - -
Sto6g2533 524 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 54 484 - -
Sto6g2533 524 MobiDBLite consensus disorder prediction 1 71 - -
Sto6g2533 524 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2533 Sto-Chr6 32273416 32278467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2533 54 478 C2H2 Transcription Factor Family AT2G02080 41.322 5.36e-82 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2533 K25870 - gmx:102663407 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g2533 6 32273416 32278467 Sto6g2533 6 32273416 32278467 ECH