Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2525 ATGCTGGAATTGGTTGGGTCATTTGGAGGACCAAACATGACTTGCCTCATCACCTTGTTTTCCATATTAATTACCTTGGAGCTGACCAGCCCACCTTCaccctcaatttctcaaaaGGTCCTAATTctcttcacacacacacacactgtagtaTATATTGCAGGTTCTAGCCAGATTATTGCTCAATATTACCAGCTGATTCGCCTGGGACAAGAGGGATACCGAAGTGTGATGGAGAACTGTAGAGACAATGCCATGGTGCTAAAGGAAGGAATAGTGAAGACAGGATGCTTCAACATACTCTCAAAGGACAATGGAGTTCCAGTGGTGGCATTCTCTCTCAAAGACCGGAGCCGGCGCGGGCACCGCGACGAGTTCAAGATCTCGGCGATGTTACGCCGGCACGGGTGGGTCGTGCCGGCGTATCCGATGCCGCCCGGCGCCGAGCACATTAACGTGCTCCGTGTCGTTGTGAGGGCGGAGTTCTCTCGCACACTGGCTGAACGCCTTGTGCTTGACATCACCAATGCAATGCATGAGCTTGAAAAGATTAataaggatgatgatgatggtgtgAAGAAGAGGATACCAATGGATGCACAAAGGGAAATCATCACTCAAGAAGCCAACAAGAGGCAAAAAGTCTTAGCAGCATAG 657 0.4505 MLELVGSFGGPNMTCLITLFSILITLELTSPPSPSISQKVLILFTHTHTVVYIAGSSQIIAQYYQLIRLGQEGYRSVMENCRDNAMVLKEGIVKTGCFNILSKDNGVPVVAFSLKDRSRRGHRDEFKISAMLRRHGWVVPAYPMPPGAEHINVLRVVVRAEFSRTLAERLVLDITNAMHELEKINKDDDDGVKKRIPMDAQREIITQEANKRQKVLAA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2525 218 Gene3D - 95 184 - -
Sto6g2525 218 Pfam Pyridoxal-dependent decarboxylase conserved domain 55 115 IPR002129 GO:0016830|GO:0019752|GO:0030170
Sto6g2525 218 PANTHER GLUTAMATE DECARBOXYLASE 46 217 - -
Sto6g2525 218 SUPERFAMILY PLP-dependent transferases 53 183 IPR015424 -
Sto6g2525 218 Gene3D - 32 94 IPR015421 GO:0003824
Sto6g2525 218 Coils Coil 167 187 - -
Sto6g2525 218 PANTHER GLUTAMATE DECARBOXYLASE 46 217 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2525 Sto-Chr6 32192917 32194523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2525 47 204 Calmodulin-binding Proteins AT2G02000 58.434 3.71e-60 194