Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2495 ATGGCTGATTTCGAGATCATTGATCTCACAGACTCCCCTCCATCATCCCCACCTCCCAGTTCCCCTCCCCGATCAAGATCCATTCGACGCCGATCCAGGCGAATTCTGAGCTTTCGAGCTTCAGCTTCCTCAAGGACAATCCTTTTTAAGATCATTAGGAGACCTAACGAAAACCCTAGCTCAGAGTATTTAACTCGCCATATGGTTCCATGGATCCCTCCAACCCCTACTGGTCAGATCTCTCAGGCTGTGAATGAGTTTCATTCCACCATGCATGGTGGTGAGCCTCAATTTTTTCAACCTTTTCCGGGGAATGATCCAAATATGGCTGCACCAGTTACCACTTTCTTGGTAACCAAGCATGGCGAGATTTGGACACAACATGAGCATGAGGAATTTGTGAAGGGGCTAGGGAACTGTGGAGGTTGCTGGGAAAGGATTGCTAGTGAATTTGTGATGACGAAGACAGCAGCAGAAGTTGAAAGCTATGCAGAAAGCTTCTTCAGGCACCTGACACAGATATGCCTTCATAGCTTGGACATGTTCGTTGAGGAATCCTCCATCCTCACCATTCCCTGTGCTGCTATGGTGGAGGAGCCCCCAACTACAAGAGTATGGGATagcattgaagaagaagaagatgtgaACATGATTGGTTTATATGGGATGGGTGGTTCTGGGAAGACAACTCTTATGAAGAAGCTCAATAATGAATTTGCCAAGAGGAGACATGATTTTGCTCTTGTGATCTGGGTGGTGGTGTCTAAAGACAGAAATACAGATCGGATTATGGAAGATATCCGACAAAAGTGTCGGATTGGAGACATGAATTGGAACAACAGATGTAAAGATGAGAAAGCAATAGAAATCTATAGGGTCATGAAACagaaaaatgttcattttgttgTTAGATGA 915 0.4328 MADFEIIDLTDSPPSSPPPSSPPRSRSIRRRSRRILSFRASASSRTILFKIIRRPNENPSSEYLTRHMVPWIPPTPTGQISQAVNEFHSTMHGGEPQFFQPFPGNDPNMAAPVTTFLVTKHGEIWTQHEHEEFVKGLGNCGGCWERIASEFVMTKTAAEVESYAESFFRHLTQICLHSLDMFVEESSILTIPCAAMVEEPPTTRVWDSIEEEEDVNMIGLYGMGGSGKTTLMKKLNNEFAKRRHDFALVIWVVVSKDRNTDRIMEDIRQKCRIGDMNWNNRCKDEKAIEIYRVMKQKNVHFVVR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2495 304 CDD SANT 125 168 IPR001005 -
Sto6g2495 304 Gene3D - 189 303 IPR027417 -
Sto6g2495 304 Gene3D - 123 174 - -
Sto6g2495 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 210 275 IPR027417 -
Sto6g2495 304 SUPERFAMILY Homeodomain-like 125 174 IPR009057 -
Sto6g2495 304 Pfam NB-ARC domain 202 302 IPR002182 GO:0043531
Sto6g2495 304 Pfam Myb-like DNA-binding domain 125 163 IPR001005 -
Sto6g2495 304 SMART sant 121 170 IPR001005 -
Sto6g2495 304 PANTHER DISEASE RESISTANCE PROTEIN RP 143 300 IPR044974 GO:0006952
Sto6g2495 304 PANTHER DISEASE RESISTANCE PROTEIN RFL1-RELATED 143 300 - -
Sto6g2495 304 MobiDBLite consensus disorder prediction 1 29 - -
Sto6g2495 304 ProSiteProfiles SANT domain profile. 120 172 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2495 Sto-Chr6 31845137 31851998 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto6g2495 NB-ARC 4.4e-21 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2495 - K13459 aprc:113859900 110.538