Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2463 ATGGAGTTCGAGTCTGAGGAGGCTGCGAAGGCGTTCTATAACTCCTATGCTCGTCGTGTTGGGTTCAGTACCCGTGTGAGCTCATCCCGGCGTTCCAGGCGTGATGGAGCTATTATACAGAGGCAATTTGTTTGTGCAAAGGAGGGGTTCCGCAATTTGAATGAGAAACGCACTAAGGATAGAGAGATTAAGCGCCCACGAACGATTACCAGAGTGGGATGCAAAGCATCCTTGTCTGTGAAAATGCATGACTCTGGCAAGTGGATTGTGTCTGGGTTTGTTAGGGAGCATAACCACGAACTCGTTCCACCCGATCAGGTGCATTGCCTTCGTTCGCACAGGCAAATATCAGGAGCTGCCAAGACATTGATTGATACTTTACAGGCTGCTGGAATGGGTCCTAGAAGAATTATGTCAGCACTCATCAAAGAGTATGGTGGGATTAGTAAAGTTGGTTTTACGGAGGTGGACTGTAGAAATTACATGAGGAATAATAGACAGAGAAGTTTGGAAGGGGACATTCAACTTGTTTTGGATTATTTGAGGCAAATGCATGCTGAAAACCCTAATTTCTTCTATGCTGTGCAAGGCGACGAGGATCAGTGCATGAACAACGTTTTCTGGGCTGATCCCAAAGCAAGgatgaattatacattttttgGTGATACTGTCACTTTTGACACTACTTACCGATCCAATAGATACCGTCTGCCCTTTGCTCCCTTCACTGGTGTCAACCATCATGGACAACCTGTTCTTTTTGGTTGTGCCTTCCTACTAAATGAATCAGAAGCATCATTTGTATGGCTTTTTAAGACATGGCTTATGGCAATGTCTGGACACCCTCCAGTGTCAATAACAACTGATCACGATTCTGTAATACGATCGGCCATAATACAAGTATTCCCCGAGACCCGTCACCGTTTCTGTAAGTGGCACATCTTTAAAAAATGTCAGGAGAAGCTATCTCACTTTTTCCTCAAACATCCTAATTTTGAAGCTGAATTTCACAAATGTGTTAACTTGACTGAGTCGATTGAGGAATTTGAGTCTTGCTGGTTAACACTTGTTGAGAGATATGATCTCAGGGACCATGAATGGCTTCAAGCAATATATTCTTCTCGCAGGCAGTGGGTACCTGTGTATTTGCGGGACACATTCTTCGCAGAAATGTCCATAACTCAGCGAAGTGATAGCATGAACTCATACTTTGATGGCTATGTGAATGCTTCAACCAATTTGAATCAATTCTTTAAGCTGTATGAAAAAGCACTAGAAAGTCGCAATGAGAAAGAAGTAAGAGCCGATTACGACACAATGAATACTTTGCCAGTATTGAGGACCCCATCTCCAATGGAAAAACAAGCATCTGAGCTGTACACTAGAAAAATTTTCACGAGGTTTCAAGAAGAGTTAGTTGGGACACTAACATTCATGGCATCCAAGGCTGAGGATGATGGAGAGGTCATTACATATCATGTAGCGAAATTTGGAGAGGACCATAAGGCATACtatgttaaatttaatgtttTGGAGATGAAATCTAATTGCAGTTGCCAAATGTTTGAATTCTCAGGCCTTCTTTGCAGACATGTTTTGGCTGTCTTTAGGGTGACCAATGTGCTTACTCTCCCATCTCATTACATATTGAAACGTTGGACCAGAAATGCTAAGAGCAATGTAATATTAGAGGACCATTCCACTGATGTATATACTTACTATTTGGAATCTCATACTGTTAGATATAATACCCTCCGACATGAGGCATTCAAATTTGTTGATGAAGGAGCAAAGTCTCCCGAAACTTATGATGTGGCAATGGATGCTTTGCAAGAAGCTGCAAAAAGAGTTGCCGAGACAATTAAAAATGAGGTAAGAACTCCCATCAGCAATGGAAAAGTTAGGAGTTGCTTTCTGAATGATGGAAGTCGTGGAAATTACACTAGTGGGACCCATGATGAGAGCTTGGTCCAGCACATGTCCCAGGATGATTTGGACAAGAATATTAGGGAACTTATGAATGAGCTTCAATCTGCAAATCGGAAGTGTGAAATTTACCGTTCTAACTTGCTCTCAGTTTTGAAAGCTGTTGAGGATCACAAGTTGGAGATGTCAGTTACGGTGCAAAACATCAAGATCAAAGCAGCAGAGCAGTCCTTGTAA 2163 0.4175 MEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMHDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHAENPNFFYAVQGDEDQCMNNVFWADPKARMNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLLNESEASFVWLFKTWLMAMSGHPPVSITTDHDSVIRSAIIQVFPETRHRFCKWHIFKKCQEKLSHFFLKHPNFEAEFHKCVNLTESIEEFESCWLTLVERYDLRDHEWLQAIYSSRRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYVNASTNLNQFFKLYEKALESRNEKEVRADYDTMNTLPVLRTPSPMEKQASELYTRKIFTRFQEELVGTLTFMASKAEDDGEVITYHVAKFGEDHKAYYVKFNVLEMKSNCSCQMFEFSGLLCRHVLAVFRVTNVLTLPSHYILKRWTRNAKSNVILEDHSTDVYTYYLESHTVRYNTLRHEAFKFVDEGAKSPETYDVAMDALQEAAKRVAETIKNEVRTPISNGKVRSCFLNDGSRGNYTSGTHDESLVQHMSQDDLDKNIRELMNELQSANRKCEIYRSNLLSVLKAVEDHKLEMSVTVQNIKIKAAEQSL 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2463 720 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 1 689 - -
Sto6g2463 720 SMART 26again6 515 542 IPR006564 GO:0008270
Sto6g2463 720 Coils Coil 662 689 - -
Sto6g2463 720 Pfam FAR1 DNA-binding domain 12 103 IPR004330 -
Sto6g2463 720 ProSiteProfiles Zinc finger SWIM-type profile. 504 540 IPR007527 GO:0008270
Sto6g2463 720 Pfam SWIM zinc finger 492 538 IPR007527 GO:0008270
Sto6g2463 720 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 689 IPR031052 GO:0006355
Sto6g2463 720 Pfam MULE transposase domain 224 317 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2463 Sto-Chr6 31522958 31531168 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto6g2463 MULE 2.5e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2463 - - gmx:100793442 1313.9