Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2434 ATGTCTAACTCTGACGGAACTACCACCAACGGTAACGGTGTGAGCAACGGCGCAATCATTGACCCCCAGaggcagcagcagcagcagtcGTCGTCCGGTAACGGAGCTCTCGCCGTCAAGAAGCCGCCGTCGAAGGACCGTCACAGCAAGGTCGACGGCCGAGGACGCCGTATACGCATGCCGATCATATGCGCCGCACGTGTCTTCCAGCTCACACGTGAGTTGGGTCACAAATCCGACGGTCAAACCATCGAGTGGCTTCTCCGCCAGGCCGAGCCTTCCATCATAGCCGCCACCGGCACCGGCACCACTCCGGCAAGCTTCTCCACTGTCTCCGTCTCCGtccgcggcggcggcggcggtgttGGTTCGAACTCCTTGTCATCCTCCTCCACCACTTCTACTTCTCTGGACCACAAGCCCCTGCTGGGTCCGACGCCCTTTATACTCGGGAAGCGCATACGGACCACCGATGATGACGCCGCCAAGGACGATGGCGTCGCGGTAGGTCCCACGGTGGGGTCTATAGTGGGGCCTGCTACTCCGGCCGGTTTGTGGGCCCTACCGACGAGACCGGACTTCGGCCAGGTGGGCCTGGAAATTCGGGTCGGAGAGACGATGAGCCTCGCTGATCTTGGCGGCGGCAGCCGACGAGTTGGGAAGAAGAGGGTTGTGCACATTGATGATGAACCAAGAAGGAAGCAGGGAGATGAATCGtgcagaagaaagagaagagaggtgCAAAAGTCAGGAGGGTGA 759 0.5507 MSNSDGTTTNGNGVSNGAIIDPQRQQQQQSSSGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVSVRGGGGGVGSNSLSSSSTTSTSLDHKPLLGPTPFILGKRIRTTDDDAAKDDGVAVGPTVGSIVGPATPAGLWALPTRPDFGQVGLEIRVGETMSLADLGGGSRRVGKKRVVHIDDEPRRKQGDESCRRKRREVQKSGG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2434 252 MobiDBLite consensus disorder prediction 120 142 - -
Sto6g2434 252 MobiDBLite consensus disorder prediction 1 56 - -
Sto6g2434 252 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 197 IPR005333 GO:0003700
Sto6g2434 252 MobiDBLite consensus disorder prediction 216 252 - -
Sto6g2434 252 MobiDBLite consensus disorder prediction 1 37 - -
Sto6g2434 252 MobiDBLite consensus disorder prediction 41 56 - -
Sto6g2434 252 MobiDBLite consensus disorder prediction 213 252 - -
Sto6g2434 252 MobiDBLite consensus disorder prediction 120 140 - -
Sto6g2434 252 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 197 - -
Sto6g2434 252 ProSiteProfiles TCP domain profile. 44 98 IPR017887 -
Sto6g2434 252 Pfam TCP family transcription factor 44 124 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2434 Sto-Chr6 31204283 31209067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2434 15 197 TCP Transcription Factor Family AT5G23280 65.591 1.39e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto6g2434 TCP 7.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2434 K16221 - cpap:110813909 253.062