Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2356 ATGATGGTTTCTGGCATTAATATTACCCTAAAGTCTAATATCCCAGCCATCATAGTTTTTGGAGACTCCTCTGTGGATTCTGGAAACAACAATGGGATTGCCACCATTCTCAAGAGCAACTTCCGGCCCTACGGCCGGGACTTCCCCGGCGGTCGCCCGACCGGCCGGTTCTGCAACGGCCGTGTCCCGCCGGACTTCATCTCGGAGGCTTTGGGCCTCAAGCCCTTCATACCTGCCTACCTAGATCCTATGTACACTATCAAAGATTTTGCCACAGGTGTTTGCTTTGCATCTGCTGGCACTGGCTATGATAATGCAACTTCTGCTGTACTTAATGTGATACCATTATGGAAGGAATTGGAGTACTACAAGGAATACCAAACCAAATTGAGAAGCTATGTTGGCGTAGAGAAAGCAAACAGGATCATAGGAGAAGCACTCTACTTGATGAGTATAGGAACCAATGATTTCCTTGAGAACTACTATGTGTTCCCAACCAGGAGATCCCAATTCAGCATCACACAGTACCAAGATTTCCTCGCGGGCATCGCCGAGGATTTCGTCCGGGAATTGTACGCGCTCGGAGCTCGCAAGATAGCCCTGACCGGCCTGATCCCGATCGGGTGCCTGCCATTGGAGAGGGCTGTAAACATGAGGAACCTCCATGCATGCAATGAAGAGTACAACCAAGTGGCCTTGGAGTTCAATAAGAAGTTGGACGTTATGGAGTCCAAACTAAACAGGGAGCTCCCAATGATGACTTTGGTGGCGGCAAATGCATATGATATCTACAACGACGTTATAAGAAGACCTTCTTCTTATGGGGATGTGGCCGTAGGGATACACCTGTGGAGGAGGCAAATCAGGGTATGTCGTGAGCTACGCATAAGACTGTGCGACGAGCGGAGTGACTATGGCTGGCTATTGTGGCACAATGGGTTGCATGGGCGTGAGCACCGTATGGTGGCCCGAAACGGTGGGTCTGATTGTGTTGGGAGGTACAGTCCCAATTTTGATAGTCTGGGAGGGTTGTGGAGAGAGCTAAACTTGCAATGTACCTGGAGGAGGAATGGCTTTAGGGGGCTACGACGGATGTTGATAGAACCAGTCCAAGTTGTGTGGCATCCCATATGGGTGCTAGGGGCTGGCACTCTACCCTTGGATTCAGATCCTCTGAGGTTTTCTCATCCCTATGTCCATATGTTTCCgtattggagaaattgggatttAGGATCACATTTGTGGTGTCGGCCTCTCCAGTTGCTACTTGCTAGGATAATGACTTCATTGTTGCCCATGGCTTTGGTGACGGCAACAGGATTCGAAGTTGCAGAGAAGGCATGTTGTTCAACAGGAACATTCGAGATGAGCTATCTGTGCAGTGATGTGAATCCACACACTTGCAGGGATGCCAACAAGTATGTGTTTTGGGATGCCTTCCATCCAAGTGAAAAAACAAATCGCATTGTGGCAAATTATTTGATTCAAAAGCTTGctagtaatttttaa 1509 0.4778 MMVSGINITLKSNIPAIIVFGDSSVDSGNNNGIATILKSNFRPYGRDFPGGRPTGRFCNGRVPPDFISEALGLKPFIPAYLDPMYTIKDFATGVCFASAGTGYDNATSAVLNVIPLWKELEYYKEYQTKLRSYVGVEKANRIIGEALYLMSIGTNDFLENYYVFPTRRSQFSITQYQDFLAGIAEDFVRELYALGARKIALTGLIPIGCLPLERAVNMRNLHACNEEYNQVALEFNKKLDVMESKLNRELPMMTLVAANAYDIYNDVIRRPSSYGDVAVGIHLWRRQIRVCRELRIRLCDERSDYGWLLWHNGLHGREHRMVARNGGSDCVGRYSPNFDSLGGLWRELNLQCTWRRNGFRGLRRMLIEPVQVVWHPIWVLGAGTLPLDSDPLRFSHPYVHMFPYWRNWDLGSHLWCRPLQLLLARIMTSLLPMALVTATGFEVAEKACCSTGTFEMSYLCSDVNPHTCRDANKYVFWDAFHPSEKTNRIVANYLIQKLASNF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2356 502 CDD SGNH_plant_lipase_like 15 497 IPR035669 -
Sto6g2356 502 Pfam GDSL-like Lipase/Acylhydrolase 437 494 IPR001087 GO:0016788
Sto6g2356 502 Pfam GDSL-like Lipase/Acylhydrolase 17 265 IPR001087 GO:0016788
Sto6g2356 502 Gene3D SGNH hydrolase 6 319 IPR036514 -
Sto6g2356 502 Gene3D SGNH hydrolase 430 501 IPR036514 -
Sto6g2356 502 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 438 502 - -
Sto6g2356 502 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 276 - -
Sto6g2356 502 PANTHER GDSL ESTERASE/LIPASE EXL3 438 502 - -
Sto6g2356 502 PANTHER GDSL ESTERASE/LIPASE EXL3 8 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2356 Sto-Chr6 30353769 30364455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2356 10 275 Pollen Coat Proteome AT1G75910 39.033 9.90e-53 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2356 - - gmx:100809260 434.491