Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2350 ATGCCAGCTGAGAACTCAAACTCAAACACTCATGATCATGAAGTCGAACCATTTGCTGAAGTTGATCCAACTGGCAGGTTCGGGCGATACAGCGATCTTCTGGGTTGTGGTGCTGTGAAAAAGGTTTATAGGGCCTTTGATCAAGAGGAGGGCATAGAGGTGGCCTGGAATCAAGTTCGGTTAAGGAATTTCAGCGAAGATCCTGTGTTATTAAATCGTCTTCGTTCTGAGGTTGAGCTACTCAGAACATTGAAGAACAAATACATCATTGTCTGTTATAGTGTCTGGAAAGATGATGAGAGAAacactttaaattttattactgAGGTGTGCACTTCTGGGAATCTGAGGTCTTACAGGAAGAAGCATCGTCATGTGTCCATTAAGGCATTGAAGAAGTGGTCTAAACAAGTCCTTGAGGGATTGGAATATCTTCATACACATGATCCATGCATTATCCATAGGGATCTCAATTGCAGCAACATCTTCATTAATGGGAATATTGGCCAGGTGAAAATTGGTGATCTTGGATTGGCTGCAATAGTGGGAAAGAGTCATGCAGCACATTCAATTATAGGGACACCAGAATATATGGCTCCAGAGTTGTACGATGAAGATTACACTGAGATGGTGGACATATACTCTTTTGGGATGTGCTTGCTTGAGATGGTTACAATGGAGATACCATATAGTGAATGTGATAGTGTCGCCAAGATATACAAAAAAGTAACAACAGGAAAAAAGCCTGAGTCTTTAAATAGGGTCACGGATCCAGAGGTGAGGGAATTCATTGAGAAATGCATAGCTCAACCAAGGGCAAGACCTTCAGCCTCAGATCTCTTGAAGGATCCTTTCTTCTCTGTACTCAACAATGATGAAGAACCAGATTCAGATAATACCAGGGTATCCATAAATGTTGGTGTTACTGTAAGTGTTAGTATATGGCATTTCTTCTCTGCTCAGATATCAGTGTATCAACAATGA 984 0.4065 MPAENSNSNTHDHEVEPFAEVDPTGRFGRYSDLLGCGAVKKVYRAFDQEEGIEVAWNQVRLRNFSEDPVLLNRLRSEVELLRTLKNKYIIVCYSVWKDDERNTLNFITEVCTSGNLRSYRKKHRHVSIKALKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFINGNIGQVKIGDLGLAAIVGKSHAAHSIIGTPEYMAPELYDEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYKKVTTGKKPESLNRVTDPEVREFIEKCIAQPRARPSASDLLKDPFFSVLNNDEEPDSDNTRVSINVGVTVSVSIWHFFSAQISVYQQ 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2350 327 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 289 - -
Sto6g2350 327 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Sto6g2350 327 Gene3D Transferase(Phosphotransferase) domain 1 111 291 - -
Sto6g2350 327 Gene3D Phosphorylase Kinase; domain 1 12 109 - -
Sto6g2350 327 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 6 289 - -
Sto6g2350 327 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2350 327 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto6g2350 327 CDD STKc_WNK 26 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2350 Sto-Chr6 30311117 30313314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2350 3 286 MAP Kinase Kinase Kinase AT5G55560 75.704 4.02e-170 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sto6g2350 Pkinase 2.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2350 K08867 - gmx:100798280 542.732