Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2345 ATGGTTTCATCTGATAAAAGTTCTGATCGCAATGTTTCTCCGGATAAATCACATCAGAAGCTGAGTTCTCATAGTGAAATTAATATGTCAAAAGAgactaatgaaaataaaattgattcaTCCGAACCAGTGGAAGCAAGAAATGTCCCTTCTGTAGTAGCTGAAAAAGAAGTGGAAGATTCTGATGCTACTGTCGATGCATTGCAATCAGATAAAGAAGGAAGTGCATGCTCTTCACCACTTGAGAAACCTTTGCAGAGCCCTAGTACTACTCGGCATGCATTACAATCACGTCAGGACAGTCCCACTATAATACATGAAAAAGTCTTGAAGGATGTAGCTAAGAAGGAAATACAGGATTCAGATGCTACTGCTGATGCACTGCAATCAGATAAAGAACGAAGTCCGTGCTCTTTACCGCATGAAAAACCTTCGCAGAAACCAAATTCTGTTCTGCATGCATTACAATCTGTTCAGGATAGCCCCTCTATAATACGTGAAAAAGTTTCTAAGGACGGATATAATTGGCGAAAATATGGCCAGAAACATGTTAAGGGAAATGAATTTATAAGGAGCTATTACAAGTGTACACATCCTAACTGCCAGGCAAAGAAGCAATTGGAACAGTCAAATAATGGGCAGATTACTGATACCATTTACATTGGTCAACACAATCATCCTCAGGTAAACACCCCGGTGCCAATTGACAGTGTTATGACTGTTGTCAAAGAAAAACCAGACAAGCCCTCTTCAGTCAGTATGGAAGACAAAGCATCAATTGAGCATGGATGCGAGTCTCAGCAGGTCAAGCTCAAGCctttggaagatcttccaatTTCAACAATTTCTACAAAGAATGAGGTGAAAGCTGCACTTGTACAATCTACTAGAACGAGGGATGTGGTACCTACCAATGAAGATCCTGAGTCAAAACGCCTGAAGAAAAACAATAGTAATGCTGATGTTACTGGGATTGAGAAGTCAGCTAGTGAATCTCGTGTTGTTGTTCAGACTTCAAGTGAGGTTGATTTTATTAACGATGGGTACCGCTGGCGCAAGTATGGGCAGAAACTAGTAAAAGGAAATCCAAATCCAAGAAGTTATTATCGATGCTCAATTCCGGGATGCCCTGTCAAAAAGCACGTGGAAAGGGCCTCTCATGACCAGAAAATTGTAATAACTACCTATGAGGGACATCACGATCATGAAAATCCCTCTGGAAGGATTGTTACTCATAACGAGGCAGCAAACACTCCCACAACAAACATCAACAGCGATTCCGTAACCAAATCGAGGGGAAACACTCCTTGTGTTCAGACAGTAGAATCCACCTGCTTTGACTCAGAAAGAAAATCAACTGAGCAGTCAAACAATGAGAACATTTCTAAATCAAAGTCTTGTGATATGGTTAAAAGTACATCAAATGAGAAAGAACAAAATGGAAACTCACATACCGAAAAAGATTCTGTCAATATTGACACCATTTGCCATTCAGGGTCTGAGCTTCCATGTAGATTAAATGAACAGAAGAAAGATGAGTATGTTGTTAACAGTAGTAATTTCAATTCTTGTTTTTCTACTGCTGAATGCATTTCTGTTGTCTATTTTATTGAGATAAGTACAATGTCCTGCAGAAATGAAGTCTTGTGGATAGAACTATGGTTGTGA 1668 0.3879 MVSSDKSSDRNVSPDKSHQKLSSHSEINMSKETNENKIDSSEPVEARNVPSVVAEKEVEDSDATVDALQSDKEGSACSSPLEKPLQSPSTTRHALQSRQDSPTIIHEKVLKDVAKKEIQDSDATADALQSDKERSPCSLPHEKPSQKPNSVLHALQSVQDSPSIIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCQAKKQLEQSNNGQITDTIYIGQHNHPQVNTPVPIDSVMTVVKEKPDKPSSVSMEDKASIEHGCESQQVKLKPLEDLPISTISTKNEVKAALVQSTRTRDVVPTNEDPESKRLKKNNSNADVTGIEKSASESRVVVQTSSEVDFINDGYRWRKYGQKLVKGNPNPRSYYRCSIPGCPVKKHVERASHDQKIVITTYEGHHDHENPSGRIVTHNEAANTPTTNINSDSVTKSRGNTPCVQTVESTCFDSERKSTEQSNNENISKSKSCDMVKSTSNEKEQNGNSHTEKDSVNIDTICHSGSELPCRLNEQKKDEYVVNSSNFNSCFSTAECISVVYFIEISTMSCRNEVLWIELWL 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2345 555 MobiDBLite consensus disorder prediction 302 316 - -
Sto6g2345 555 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 492 IPR044810 GO:0003700
Sto6g2345 555 SMART WRKY_cls 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g2345 555 SMART WRKY_cls 345 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g2345 555 MobiDBLite consensus disorder prediction 299 318 - -
Sto6g2345 555 SUPERFAMILY WRKY DNA-binding domain 166 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g2345 555 MobiDBLite consensus disorder prediction 104 140 - -
Sto6g2345 555 Gene3D WRKY domain 159 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g2345 555 SUPERFAMILY WRKY DNA-binding domain 337 405 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g2345 555 MobiDBLite consensus disorder prediction 52 67 - -
Sto6g2345 555 ProSiteProfiles WRKY domain profile. 340 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g2345 555 MobiDBLite consensus disorder prediction 1 149 - -
Sto6g2345 555 MobiDBLite consensus disorder prediction 71 103 - -
Sto6g2345 555 Pfam WRKY DNA -binding domain 346 403 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g2345 555 Pfam WRKY DNA -binding domain 171 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g2345 555 MobiDBLite consensus disorder prediction 448 489 - -
Sto6g2345 555 ProSiteProfiles WRKY domain profile. 165 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto6g2345 555 MobiDBLite consensus disorder prediction 416 435 - -
Sto6g2345 555 Gene3D WRKY domain 332 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto6g2345 555 MobiDBLite consensus disorder prediction 457 489 - -
Sto6g2345 555 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2345 Sto-Chr6 30279681 30283304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2345 154 447 WRKY Transcription Factor Family AT2G04880 47.811 4.66e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto6g2345 WRKY 3.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2345 K18834 - gmx:100781219 503.442