Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto6g2344 ATGTTGAACTTCTTTCCTCAAATGGGTATTAGCTCAAATGGCagattcctctttttttttttttttgtctgtgatttttttttatgtgaccAATTGAAGTATGAATTTCTTGTTGAATGCATCAGTAGAAGTTCAGGGCCACAAAACACGCATAATCCCCCCGGCAAGAAAAGCCGCTTCGCTTCGGTCACTTTCATCACCGTAGATTCTTGTTCCCTTACAATGCAAGCATCAGAGCACCATACAAGTCCAAGCACGTACTACCAACCAATGCAGCAAACCGAATCCTACTGCTTCCCGCAGTATCATCATCAGCTACTATACTGCAACAGCAGCGATATCAGAAGCCATGGGAAGAACAATCCGACTTGTTCCGAACTTTACTGCACATTGGAGTCATCCTCTGCGGTTTACAACAATTCCGCTTCAACGCTGAGTTTCTCCCCAAACGGCGGCAGCCCAATGTCGCATCAAGATTCATACTCATACTCGTATTCATATCCGCCGGATCAGCACCATTCCCCTGACAATACTACTTGCGGATCATCGTGCGTAACCGATGATCCGAAGAATAACCTGAAGCACAAGTTGAGAGAGTTGGAGAGCGCGATGTTCGGCCCCGATTCCGACAACGTCGATAGCTACGTCGACAATGACAGCTTGATGAACATCGAGGAGATGGACAGTTGGGGAAGAACGATGGCGGTGATCTCGAGCAAGGACCTGAAGCAAGTCCTGGTCGCGTGCGCGAGAGCCATCGCGGACGACGATATGCTCATGGCTCGGTGGCTGATGGACGAGCTGCGGGAGATGGTGTCGGTTTCCGGCGAGCCGATCCAGAGATTGGGAGCGTATATGTTGGAAGGGCTCGTGGCGAGGCTATCGGCGTCCGGGAGTTGGATATACAGAGCCGCGAGTACAGCCGAGGTGCTCTCGTATGTGCACGTACTGTATGAGGTTTGTCCGTATTTCAAATTCGGCTACATGTCCGCCAACGGCGCCATCGCCGAAGCCATGAAGGACGAATCGCGAGTTCACATCATTGATTTCCAGATCGCTCAGGGGAGTCAGTGGATCGCTCTGATCCAGGCCTTCGCGGCGCGGCCCGGCGGGCCGCCCCGCATCCGTATCACCGCCGTGGTCGACGATCCCGCCTCGTCGGCCCACGGGCTGGACATCGTCGGGAAGAGGCTGTCCAGACTCGCCCGGAAGTTCAACGTCCCGTTCGAGTTCCACGCGGCGGCGGATATTATCTCCGGGTGCGATGTTCGGAAGCAGGAGGAGGCTCTGGCCGTGAATTTCGCGTTCGTGCTGCACCACGTGCCGGACGAGAGCGTGATGAGCACGCACAACCACCGTGACCGGCTGTTACGCCTCGTGAAGAGCCTGTCTCCGAAGGTGGTCACGCTGGTGGAGCAAGAATGTAACACCAATACGGCGCCGTTTTTGCCGCGTTTCATGGAGACGCTGGACTACTACGCGGCCATGTTCGAGTCCATGGATGTGACCTTGCCGAGAGACGACAAGCGGAGGATCAACGTGGAGCAGCATTGCCTGGCGAGGGATGTTGTGAACATCGTGGCTTGCGAAGGGGTGGAGAGGGTGGAGCGACACGAGGTGCTCGGGAAGTGGAGGTCGAGGTTCGCGATGGCAGGGTTCACGCCGTACCCTCTGAGCCCGTTGGTGAATGGTACCATCAAGAGGTTGCTGGATAACTACTGCCATAGGTATAGGCTTGAGGAGAGAGATGGGGCTCTGTATCTTGGTTGGATGGATAGAGATTTGGTTGCTTCTTGTGCGTGGAAGTGA 1809 0.5357 MLNFFPQMGISSNGRFLFFFFFVCDFFLCDQLKYEFLVECISRSSGPQNTHNPPGKKSRFASVTFITVDSCSLTMQASEHHTSPSTYYQPMQQTESYCFPQYHHQLLYCNSSDIRSHGKNNPTCSELYCTLESSSAVYNNSASTLSFSPNGGSPMSHQDSYSYSYSYPPDQHHSPDNTTCGSSCVTDDPKNNLKHKLRELESAMFGPDSDNVDSYVDNDSLMNIEEMDSWGRTMAVISSKDLKQVLVACARAIADDDMLMARWLMDELREMVSVSGEPIQRLGAYMLEGLVARLSASGSWIYRAASTAEVLSYVHVLYEVCPYFKFGYMSANGAIAEAMKDESRVHIIDFQIAQGSQWIALIQAFAARPGGPPRIRITAVVDDPASSAHGLDIVGKRLSRLARKFNVPFEFHAAADIISGCDVRKQEEALAVNFAFVLHHVPDESVMSTHNHRDRLLRLVKSLSPKVVTLVEQECNTNTAPFLPRFMETLDYYAAMFESMDVTLPRDDKRRINVEQHCLARDVVNIVACEGVERVERHEVLGKWRSRFAMAGFTPYPLSPLVNGTIKRLLDNYCHRYRLEERDGALYLGWMDRDLVASCAWK 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto6g2344 602 Pfam GRAS domain family 242 602 IPR005202 -
Sto6g2344 602 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 87 602 IPR005202 -
Sto6g2344 602 ProSiteProfiles GRAS family profile. 233 602 IPR005202 -
Sto6g2344 602 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 87 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto6g2344 Sto-Chr6 30273154 30276071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto6g2344 87 602 GRAS Transcription Factor Family AT5G48150 60.075 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto6g2344 GRAS 1.8e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto6g2344 - - gmx:100796496 734.561